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1. Peressutti SR, Costagliola M, Artigas LF, Hozbor C: [A comparative study of bacterioplankton structure in Argentinian Sea waters by the 454-tag pyrosequencing method]. Rev Argent Microbiol; 2010 Oct-Dec;42(4):288-97

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] [A comparative study of bacterioplankton structure in Argentinian Sea waters by the 454-tag pyrosequencing method].
  • [Transliterated title] Estudio comparativo de la estructura del bacterioplancton en aguas del Mar Argentino mediante el método de pirosecuenciación 454 tag.
  • The present study provides the first information about diversity and abundance of microbial communities in two environments of the Argentinian Sea by the 454 - tag pyrosequencing technique.
  • We observed more than 4,600 unique bacterial sequences from 36,188 tag amplicons, forming 280 phylotypes.
  • In addition, nearly 2,700 unique sequences from more than 47,700 tags identified as Archaea, defined only 5 different phylotypes.
  • The most abundant tag sequences included previously characterized taxa, although we also retrieved a large number of highly diverse, low-abundant phylotypes which constitute a largely unexplored "rare" biosphere.
  • [MeSH-minor] Argentina. Biodiversity. Expressed Sequence Tags. Phylogeny. Phytoplankton / classification. Phytoplankton / genetics. Phytoplankton / isolation & purification. Reproducibility of Results. Species Specificity

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  • (PMID = 21229200.001).
  • [ISSN] 0325-7541
  • [Journal-full-title] Revista Argentina de microbiología
  • [ISO-abbreviation] Rev. Argent. Microbiol.
  • [Language] spa
  • [Publication-type] Comparative Study; English Abstract; Journal Article
  • [Publication-country] Argentina
  • [Chemical-registry-number] 0 / RNA, Ribosomal, 16S
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2. Solis-Coria A, Vargas-González R, Sotelo-Avila C: Rhabdomyomatous mesenchymal hamartoma presenting as a skin tag in the sternoclavicular area. Pathol Oncol Res; 2007;13(4):375-8
The Weizmann Institute of Science GeneCards and MalaCards databases. gene/protein/disease-specific - MalaCards for skin tag .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Rhabdomyomatous mesenchymal hamartoma presenting as a skin tag in the sternoclavicular area.
  • Typically, it appears as a skin tag, papule, nodule or a mass involving the face or sternal notch.
  • A 28-day-old girl presented with a 1.4 x 0.8 cm soft skin tag in the right sternoclavicular area.
  • Physical examination revealed no congenital anomalies.
  • Thin epidermis lined the outside of the tag.
  • We report a patient with a RMH in a site not previously reported and discuss the differential diagnosis.
  • [MeSH-major] Hamartoma / pathology. Skin Diseases / pathology


3. Fuchs SM, Raines RT: Polyarginine as a multifunctional fusion tag. Protein Sci; 2005 Jun;14(6):1538-44
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Polyarginine as a multifunctional fusion tag.
  • Here, we provide a thorough analysis of the effect of an R(9) tag on the attributes of a model protein: bovine pancreatic ribonuclease (RNase A).
  • The R(9) tag diminishes the conformational stability of RNase A (DeltaT(m)=-8 degrees C in phosphate-buffered saline).
  • The tag does not compromise the enzymatic activity of RNase A.
  • An R(9) tag facilitates the purification of RNase A by cation-exchange chromatography and enables the adsorption of RNase A on glass slides and silica resin with the retention of enzymatic activity.
  • The tag can be removed precisely and completely by treatment with carboxypeptidase B.
  • Finally, the R(9) tag increases both the cellular uptake of RNase A and the cytotoxicity of G88R RNase A, a variant that evades the cytosolic ribonuclease inhibitor protein.
  • Thus, we conclude that polyarginine is a versatile protein fusion tag.

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  • (PMID = 15930002.001).
  • [ISSN] 0961-8368
  • [Journal-full-title] Protein science : a publication of the Protein Society
  • [ISO-abbreviation] Protein Sci.
  • [Language] ENG
  • [Grant] United States / NIGMS NIH HHS / GM / R01 GM044783; United States / NIGMS NIH HHS / GM / GM44783; United States / NCI NIH HHS / CA / R01 CA073808; United States / NCI NIH HHS / CA / CA73808; United States / PHS HHS / / 08349
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, P.H.S.
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Peptides; 0 / Recombinant Fusion Proteins; 25212-18-4 / polyarginine; EC 3.1.27.5 / Ribonuclease, Pancreatic
  • [Other-IDs] NLM/ PMC2253384
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4. Carty NC, Nash K, Lee D, Mercer M, Gottschall PE, Meyers C, Muzyczka N, Gordon MN, Morgan D: Adeno-associated Viral (AAV) Serotype 5 Vector Mediated Gene Delivery of Endothelin-converting Enzyme Reduces Aβ Deposits in APP + PS1 Transgenic Mice. Mol Ther; 2008 Sep;16(9):1580-1586

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • In this study, we investigated the effects of an intracranial administration of a seroptype 5 recombinant adeno-associated viral vector (rAAV) containing the ECE-1 synthetic gene on amyloid deposition in amyloid precursor protein (APP) plus presenilin-1 (PS1) transgenic mice.
  • Immunohistochemical testing for the hemagglutinin (HA) tag appended to ECE revealed strong expression in areas surrounding the injection sites but minimal expression in the contralateral regions.

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  • [Copyright] Copyright © 2008 The American Society of Gene Therapy. Published by Elsevier Inc. All rights reserved.
  • (PMID = 28189012.001).
  • [ISSN] 1525-0024
  • [Journal-full-title] Molecular therapy : the journal of the American Society of Gene Therapy
  • [ISO-abbreviation] Mol. Ther.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
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5. Hiatt JB, Patwardhan RP, Turner EH, Lee C, Shendure J: Parallel, tag-directed assembly of locally derived short sequence reads. Nat Methods; 2010 Feb;7(2):119-22
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Parallel, tag-directed assembly of locally derived short sequence reads.
  • A long DNA fragment library is converted to a population of nested sublibraries, and a tag sequence directs grouping of short reads derived from the same long fragment, enabling localized assembly of long fragment sequences.

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  • (PMID = 20081835.001).
  • [ISSN] 1548-7105
  • [Journal-full-title] Nature methods
  • [ISO-abbreviation] Nat. Methods
  • [Language] ENG
  • [Grant] United States / NIGMS NIH HHS / GM / GM007266-35; United States / NIGMS NIH HHS / GM / T32 GM007266; United States / NIGMS NIH HHS / GM / T32 GM007266-35; United States / NIGMS NIH HHS / GM / T32GM007266
  • [Publication-type] Evaluation Studies; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Other-IDs] NLM/ NIHMS185279; NLM/ PMC2848820
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6. Good mews for NMC as London property gets hefty price tag. Nurs Stand; 2006 Aug 16;20(49):7

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Good mews for NMC as London property gets hefty price tag.

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  • (PMID = 28086394.001).
  • [ISSN] 2047-9018
  • [Journal-full-title] Nursing standard (Royal College of Nursing (Great Britain) : 1987)
  • [ISO-abbreviation] Nurs Stand
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] England
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7. Lee WA, Martin TD, Hess PJ, Beaver TM, Huber TS: Maldeployment of the TAG thoracic endograft. J Vasc Surg; 2007 Nov;46(5):1032-5
COS Scholar Universe. author profiles.

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Maldeployment of the TAG thoracic endograft.
  • The TAG thoracic endograft is a commercially available device used for endovascular repair of thoracic aneurysms.
  • This report describes two cases of deployment failure of the TAG device and the bailout techniques used to correct the problem and complete the procedure.
  • Although this is an extremely rare occurrence, the rapid recognition of the problem and ability to correct it by using catheter-based techniques are important during endovascular treatment of thoracic aortic diseases using the TAG device.

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  • (PMID = 17980287.001).
  • [ISSN] 0741-5214
  • [Journal-full-title] Journal of vascular surgery
  • [ISO-abbreviation] J. Vasc. Surg.
  • [Language] eng
  • [Publication-type] Case Reports; Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
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8. Clinton V, Berkshire: Help comes with a price tag for those with disabilities. Nurs Stand; 2007 Jun 06;21(39):32

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Help comes with a price tag for those with disabilities.
  • I guess help only comes with a price tag.

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  • (PMID = 28006615.001).
  • [ISSN] 2047-9018
  • [Journal-full-title] Nursing standard (Royal College of Nursing (Great Britain) : 1987)
  • [ISO-abbreviation] Nurs Stand
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] England
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9. Whistleblower tag may discourage reports of malpractice, says NMC. Nurs Stand; 2009 Sep 30;24(4):7

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Whistleblower tag may discourage reports of malpractice, says NMC.

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  • (PMID = 28033752.001).
  • [ISSN] 2047-9018
  • [Journal-full-title] Nursing standard (Royal College of Nursing (Great Britain) : 1987)
  • [ISO-abbreviation] Nurs Stand
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] England
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10. Bord A, Valsky DV, Yagel S: Prenatal sonographic diagnosis of congenital perineal skin tag: case report and review of the literature. Prenat Diagn; 2006 Nov;26(11):1065-7
The Weizmann Institute of Science GeneCards and MalaCards databases. gene/protein/disease-specific - MalaCards for skin tag .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Prenatal sonographic diagnosis of congenital perineal skin tag: case report and review of the literature.
  • BACKGROUND: Skin tags, or acrochordons, are benign, soft, fleshy tumors that are composed of hyperplastic epidermis covering a dermal connective tissue stalk.
  • METHODS: Case report of a congenital perineal skin tag that presented as a perineal tumor during second-trimester sonographic scan at 23 weeks' gestation.
  • Literature review of the medical literature using Pubmed(R) and the search terms acrochordon, fibroepithelial polyp (FEP), and skin tag.
  • The lesion was removed; pathologic examination revealed a lipomatous skin tag.
  • Literature review showed skin tags associated with different medical conditions.
  • In the present case, this was an innocuous finding.
  • [MeSH-major] Lipomatosis / ultrasonography. Skin Neoplasms / ultrasonography. Ultrasonography, Prenatal

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  • (PMID = 16952203.001).
  • [ISSN] 0197-3851
  • [Journal-full-title] Prenatal diagnosis
  • [ISO-abbreviation] Prenat. Diagn.
  • [Language] eng
  • [Publication-type] Case Reports; Journal Article; Review
  • [Publication-country] England
  • [Number-of-references] 6
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11. Tsuji S, Tanaka T, Hirabayashi N, Kato S, Akitomi J, Egashira H, Waga I, Ohtsu T: RNA aptamer binding to polyhistidine-tag. Biochem Biophys Res Commun; 2009 Aug 14;386(1):227-31
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] RNA aptamer binding to polyhistidine-tag.
  • Polyhistidine-tag (His-tag) is a powerful tool for purification of recombinant protein.
  • His-tagged protein can be affinity-purified by using resins immobilizing Ni2+ or anti-His-tag antibodies.
  • In the present study, we isolated RNA aptamers binding to His-tag.
  • In the presence of divalent cations, shot47 was substitutable for antibodies against His-tag on ELISA, immunoprecipitation, and Western blotting.

  • Hazardous Substances Data Bank. (L)-HISTIDINE .
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  • (PMID = 19520059.001).
  • [ISSN] 1090-2104
  • [Journal-full-title] Biochemical and biophysical research communications
  • [ISO-abbreviation] Biochem. Biophys. Res. Commun.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Antibodies; 0 / Aptamers, Nucleotide; 0 / Macrophage Migration-Inhibitory Factors; 0 / Proteins; 26062-48-6 / polyhistidine; 4QD397987E / Histidine; 63231-63-0 / RNA
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12. Ting CK, Lin WT, Huang YT: Multi-objective tag SNPs selection using evolutionary algorithms. Bioinformatics; 2010 Jun 1;26(11):1446-52

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Multi-objective tag SNPs selection using evolutionary algorithms.
  • A subset of SNPs (called tag SNPs) is sufficient for capturing alleles of bi-allelic and even multi-allelic variants.
  • However, accuracy and power of tag SNPs are affected by several factors, including genotyping failure, errors and tagging bias of certain alleles.
  • In addition, different sets of tag SNPs should be selected for fulfilling requirements of various genotyping platforms and projects.
  • RESULTS: This study formulates the problem of selecting tag SNPs into a four-objective optimization problem that minimizes the total amount of tag SNPs, maximizes tolerance for missing data, enlarges and balances detection power of each allele class.
  • This method provides users with great flexibility to extract different sets of tag SNPs for different platforms and scenarios (e.g. up to 100 tags and 10% missing rate).
  • In particular, a small number of additional tag SNPs can provide sufficient tolerance and balanced power given the low missing and error rates of today's genotyping platforms.

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  • (PMID = 20385729.001).
  • [ISSN] 1367-4811
  • [Journal-full-title] Bioinformatics (Oxford, England)
  • [ISO-abbreviation] Bioinformatics
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] England
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13. Hurlow J: Tag F315: an opportunity for WOC nurses. J Wound Ostomy Continence Nurs; 2006 May-Jun;33(3):296-304; discussion 304
MedlinePlus Health Information. consumer health - Urinary Tract Infections.

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Tag F315: an opportunity for WOC nurses.
  • Of the estimated $16.3 billion spent annually, 90% is spent on management, whereas only 10% is spent on diagnosis and treatment.
  • With their June 2005 release of the F315 tag, the Centers for Medicare and Medicaid Services are taking steps to change the circumstances of this disorder.
  • This tag provides several guidelines for continence care.

  • MedlinePlus Health Information. consumer health - Urinary Incontinence.
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  • (PMID = 16717521.001).
  • [ISSN] 1071-5754
  • [Journal-full-title] Journal of wound, ostomy, and continence nursing : official publication of The Wound, Ostomy and Continence Nurses Society
  • [ISO-abbreviation] J Wound Ostomy Continence Nurs
  • [Language] ENG
  • [Publication-type] Journal Article; Review
  • [Publication-country] United States
  • [Number-of-references] 27
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14. Takahashi T, Nishida T, Sakurai S, Kanda T, Sawaki A, Wada R, Hasegawa T, Hirota S: Validation of genotyping of gastrointestinal stromal tumor in Japan. J Clin Oncol; 2009 May 20;27(15_suppl):e21502

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • METHODS: Three DNA extraction methods (QIAamp, DEXPAT, or original) and four PCR methods (Ex Taq, AmpliTaq condition-1, AmpliTaq condition-2, or QIAGEN Tag) were compared using 20 paraffin-embedded specimens with special reference to sequencing data obtained from cDNA from corresponding 20 fresh GIST samples.
  • RESULTS: In evaluation of PCR method, the protocol with Ex Taq showed 100% amplication of DNA and sequence agreement, the protocol with QIAGEN Tag 99%, and the protocol with AmpliTaq condition-2 86% agreement, and the protocol with AmpliTaq condition-1 showed much less amplication and higher disagreement.

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  • (PMID = 27963392.001).
  • [ISSN] 1527-7755
  • [Journal-full-title] Journal of clinical oncology : official journal of the American Society of Clinical Oncology
  • [ISO-abbreviation] J. Clin. Oncol.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
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15. Lai R Sr, Feng L, Liu L, Xie L, Wu X, Zhang S, Tang X, Geng J, Chen T: The clinical pathogensis significance associated with mutation of APC MCR in colorectal neoplasms. J Clin Oncol; 2009 May 20;27(15_suppl):e15119

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • RESULTS: The codon mutations were three variations: 1493(ACG > ACA), 63/69(91.3%); 1367(CAG > TAG), 1/69(1.4%) and 1328(CAG>TAG), 5/69(7.2%).

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  • (PMID = 27960846.001).
  • [ISSN] 1527-7755
  • [Journal-full-title] Journal of clinical oncology : official journal of the American Society of Clinical Oncology
  • [ISO-abbreviation] J. Clin. Oncol.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
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16. Manga P, Goldberg JD, Belitskaya-Levy I, Lobach I, Polsky D, Pavlick A, Shapiro R, Berman R, Osman I, Ostrer H: Developing genetic markers for melanoma risk assessment. J Clin Oncol; 2009 May 20;27(15_suppl):9046

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • This approach is subject to recall bias and excludes at-risk groups such as those with darker skin pigmentation.
  • Candidate genes were selected based on involvement in determining melanoma predisposition factors (skin pigmentation and DNA repair capability) and previous studies showing association.
  • Three genes, ERCC1, ERCC4 (DNA repair) and MATP (skin pigmentation) were selected.
  • Tag Single Nucleotide Polymorphisms (tSNPs) were selected using Haploview (Hapmap.org) and DNA genotyped (Sequenom Inc, San Diego, CA).

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  • (PMID = 27962112.001).
  • [ISSN] 1527-7755
  • [Journal-full-title] Journal of clinical oncology : official journal of the American Society of Clinical Oncology
  • [ISO-abbreviation] J. Clin. Oncol.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
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17. Taberlet P, Coissac E, Pompanon F, Gielly L, Miquel C, Valentini A, Vermat T, Corthier G, Brochmann C, Willerslev E: Power and limitations of the chloroplast trn L (UAA) intron for plant DNA barcoding. Nucleic Acids Res; 2007 Feb 01;35(3):e14

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • DNA barcoding should provide rapid, accurate and automatable species identifications by using a standardized DNA region as a tag.
  • Based on sequences available in GenBank and sequences produced for this study, we evaluated the resolution power of the whole chloroplast trn L (UAA) intron (254-767 bp) and of a shorter fragment of this intron (the P6 loop, 10-143 bp) amplified with highly conserved primers.

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  • [Copyright] © 2006 The Author(s).
  • (PMID = 28383734.001).
  • [ISSN] 1362-4962
  • [Journal-full-title] Nucleic acids research
  • [ISO-abbreviation] Nucleic Acids Res.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] England
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18. García-Escudero V, García-Gómez A, Gargini R, Martín-Bermejo MJ, Langa E, de Yébenes JG, Delicado A, Ávila J, Moreno-Flores MT, Lim F: Prevention of Senescence Progression in Reversibly Immortalized Human Ensheathing Glia Permits Their Survival After Deimmortalization. Mol Ther; 2010 Feb;18(2):394-403

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • We used lentivectors with Cre/loxP technology to achieve reversible gene transfer of BMI1, SV40 large T antigen (TAg), a short hairpin RNA against p53 (shp53), and the catalytic subunit of telomerase (TERT) in primary cultures of hOEG from human donor cadaver olfactory bulbs.
  • Strikingly, these were also the only cells which continued to proliferate after transgene removal by Cre recombinase delivery, whereas hOEG immortalized by shp53 or TAg in combination with TERT entered into growth arrest and died.

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  • [Copyright] Copyright © 2010 The American Society of Gene & Cell Therapy. Published by Elsevier Inc. All rights reserved.
  • (PMID = 28182940.001).
  • [ISSN] 1525-0024
  • [Journal-full-title] Molecular therapy : the journal of the American Society of Gene Therapy
  • [ISO-abbreviation] Mol. Ther.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
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19. Liu TF, Sung WK, Li Y, Liu JJ, Mittal A, Mao PL: Effective algorithms for tag SNP selection. J Bioinform Comput Biol; 2005 Oct;3(5):1089-106
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Effective algorithms for tag SNP selection.
  • By making use of linkage disequilibrium, we can reduce the experiment cost by genotyping a subset of SNPs, called Tag SNPs, which have a strong association with the ungenotyped SNPs, while are as independent from each other as possible.
  • The problem of selecting Tag SNPs is NP-complete; when there are large number of SNPs, in order to avoid extremely long computational time, most of the existing Tag SNP selection methods first partition the SNPs into blocks based on certain block definitions, then Tag SNPs are selected in each block by brute-force search.
  • The size of the Tag SNP set obtained in this way may usually be reduced further due to the inter-dependency among blocks.
  • This paper proposes two algorithms, TSSA and TSSD, to tackle the block-independent Tag SNP selection problem.
  • [MeSH-major] Algorithms. Chromosome Mapping / methods. DNA / genetics. DNA Mutational Analysis / methods. Expressed Sequence Tags. Polymorphism, Single Nucleotide / genetics. Sequence Alignment / methods. Sequence Analysis, DNA / methods

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  • (PMID = 16278949.001).
  • [ISSN] 0219-7200
  • [Journal-full-title] Journal of bioinformatics and computational biology
  • [ISO-abbreviation] J Bioinform Comput Biol
  • [Language] eng
  • [Publication-type] Comparative Study; Journal Article
  • [Publication-country] England
  • [Chemical-registry-number] 9007-49-2 / DNA
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20. Rasi A, Soltani-Arabshahi R, Shahbazi N: Skin tag as a cutaneous marker for impaired carbohydrate metabolism: a case-control study. Int J Dermatol; 2007 Nov;46(11):1155-9
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Skin tag as a cutaneous marker for impaired carbohydrate metabolism: a case-control study.
  • BACKGROUND: Skin tags are common benign skin tumors usually occurring on the neck and major flexors of older people.
  • OBJECTIVE: To investigate and compare the prevalence of diabetes and impaired glucose tolerance (IGT) in patients with skin tag and a control group.
  • PATIENTS AND METHODS: A case-control study was conducted in individuals over 15 years old, comparing cases (n = 104) with at least three skin tags and age-, sex-, and body mass index (BMI)-matched controls (n = 94) without skin tag.
  • RESULTS: Patients with skin tag had higher frequency of diabetes than the control group (23.07% vs. 8.51%, chi(2)-test, P = 0.005).
  • There was a positive correlation between the total number of skin tags and the mean fasting plasma glucose (Pearson correlation, r = 0.260, P = 0.031); patients with more than 30 skin tags were particularly at an increased risk of diabetes (52.0%).
  • No correlation was found between the number of skin tags and BMI.
  • We did not find any correlation between the anatomical localization of skin tags and impaired carbohydrate metabolism, except for skin tags under the breast in women.
  • CONCLUSION: These results show an increased risk of diabetes mellitus in patients with multiple skin tags.
  • With regard to the importance of early diagnosis of diabetes, we recommend a high level of suspicion for impaired carbohydrate metabolism in patients with skin tag.
  • [MeSH-major] Blood Glucose / analysis. Carbohydrate Metabolism. Diabetes Complications. Glucose Intolerance. Skin Neoplasms / complications

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  • MedlinePlus Health Information. consumer health - Diabetes Complications.
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  • (PMID = 17988334.001).
  • [ISSN] 0011-9059
  • [Journal-full-title] International journal of dermatology
  • [ISO-abbreviation] Int. J. Dermatol.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Blood Glucose
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21. Milani L, Syvänen AC: Genotyping single nucleotide polymorphisms by multiplex minisequencing using tag-arrays. Methods Mol Biol; 2009;529:215-29
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Genotyping single nucleotide polymorphisms by multiplex minisequencing using tag-arrays.
  • We present here a flexible system that combines highly specific genotyping by minisequencing single-base extension with the advantages of a microarray format that allows highly multiplexed and parallel analysis of any custom selected SNPs.Cyclic minisequencing reactions with fluorescently labeled dideoxynucleotides (ddNTPs) are performed in solution using multiplex PCR product as template and detection primers, designed to anneal immediately adjacent and upstream of the SNP site.
  • The detection primers carry unique Tag-sequences at their 5' ends and oligonucleotides complementary to the Tag-sequence, cTags, are immobilized on a microarray.

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  • (PMID = 19381977.001).
  • [ISSN] 1064-3745
  • [Journal-full-title] Methods in molecular biology (Clifton, N.J.)
  • [ISO-abbreviation] Methods Mol. Biol.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Oligonucleotides; 9006-04-6 / Rubber; Z4152N8IUI / Silicon
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22. Măndoiu II, Trincă D: Exact and approximation algorithms for DNA tag set design. J Comput Biol; 2006 Apr;13(3):732-44
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Exact and approximation algorithms for DNA tag set design.
  • In this paper, we propose new solution methods for designing tag sets for use in universal DNA arrays.
  • First, we give integer linear programming formulations for two previous formalizations of the tag set design problem.
  • Second, we note the benefits of periodic tags and establish an interesting connection between the tag design problem and the problem of packing the maximum number of vertex-disjoint directed cycles in a given graph.
  • We show that combining a simple greedy cycle packing algorithm with a previously proposed alphabetic tree search strategy yields an increase of over 40% in the number of tags compared to previous methods.

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  • (PMID = 16706722.001).
  • [ISSN] 1066-5277
  • [Journal-full-title] Journal of computational biology : a journal of computational molecular cell biology
  • [ISO-abbreviation] J. Comput. Biol.
  • [Language] eng
  • [Publication-type] Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
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23. McLean GR, Cho CW, Trotter B, Schrader JW: RIVETS: the recombinant immunoglobulin and viral epitope tag system. J Immunol Methods; 2006 Aug 31;315(1-2):208-13
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] RIVETS: the recombinant immunoglobulin and viral epitope tag system.
  • The human monoclonal antibody 8F9 binds to a linear 10 amino acid epitope that is present within the N-terminal region of the gB envelope glycoprotein of HCMV.
  • Here we show that this short sequence (ETIYNTTLKY) can function as a tag for the detection of recombinant proteins using antibody 8F9.
  • The AD-2S1 tag was recognized by 8F9 whether present at the N- or C-terminus of recombinant proteins and tagged recombinant proteins could be quantified with multiple analytical techniques such as ELISA, western blotting, immunofluorescence and flow cytometry.
  • Production of 8F9 using different constant regions or constant regions from different species enhances the convenience and range of use of this system which we term the Recombinant Immunoglobulin and Viral Epitope Tag System or RIVETS.

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  • (PMID = 16919678.001).
  • [ISSN] 0022-1759
  • [Journal-full-title] Journal of immunological methods
  • [ISO-abbreviation] J. Immunol. Methods
  • [Language] eng
  • [Publication-type] Comparative Study; Evaluation Studies; Journal Article
  • [Publication-country] Netherlands
  • [Chemical-registry-number] 0 / Antibodies, Monoclonal; 0 / Antigens, Viral; 0 / Epitopes; 0 / Immunoglobulin G; 0 / Recombinant Proteins; 0 / Viral Envelope Proteins; 0 / human cytomegalovirus antigen p55-52
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24. Sham PC, Ao SI, Kwan JS, Kao P, Cheung F, Fong PY, Ng MK: Combining functional and linkage disequilibrium information in the selection of tag SNPs. Bioinformatics; 2007 Jan 1;23(1):129-31
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Combining functional and linkage disequilibrium information in the selection of tag SNPs.
  • We have developed an online program, WCLUSTAG, for tag SNP selection that allows the user to specify variable tagging thresholds for different SNPs.
  • Tag SNPs are selected such that a SNP with user-specified tagging threshold C will have a minimum R2 of C with at least one tag SNP.

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  • (PMID = 17060359.001).
  • [ISSN] 1367-4811
  • [Journal-full-title] Bioinformatics (Oxford, England)
  • [ISO-abbreviation] Bioinformatics
  • [Language] eng
  • [Grant] United States / NEI NIH HHS / EY / EY-12562
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Genetic Markers
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25. Erdem E, Zeng H, Zhou J, Shi J, Wells DL: Investigation of RFID tag readability for pharmaceutical products at item level. Drug Dev Ind Pharm; 2009 Nov;35(11):1312-24
MedlinePlus Health Information. consumer health - Medicines.

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Investigation of RFID tag readability for pharmaceutical products at item level.
  • There is a pressing need to analyze the performance of RFID tags attached to various pharmaceutical dosage forms.
  • Factors considered include dosage forms, ion concentration in solution, angle of rotation, and distance between the RFID tag and the interrogator.
  • RESULTS: Compared with empty container, the filling of any representative dosage forms causes deteriorated readability for the tag attached to container.
  • In addition, an increase in distance (equivalent to higher RF attenuation level) and higher ion concentration in solution beyond a certain level have detrimental effect on tag readability.
  • CONCLUSION: The analysis shows that the RFID tag readability is strongly dependent on the factors that are experimented with.

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  • (PMID = 19832631.001).
  • [ISSN] 1520-5762
  • [Journal-full-title] Drug development and industrial pharmacy
  • [ISO-abbreviation] Drug Dev Ind Pharm
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Dosage Forms; 0 / Pharmaceutical Preparations
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26. Mathers DA, McCarthy SM, Cooke JE, Ghavanini AA, Puil E: Effects of the beta-amino acid antagonist TAG on thalamocortical inhibition. Neuropharmacology; 2009 Jun;56(8):1097-105
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Effects of the beta-amino acid antagonist TAG on thalamocortical inhibition.
  • Given their hypothesized roles, we investigated effects of the putative beta-amino acid antagonist 6-aminomethyl-3-methyl-4H-1,2,4-benzothiadiazine-1,1-dioxide (TAG) on synaptic inhibition in dorsal thalamus.
  • TAG antagonized mixed IPSCs (IC(50) approximately 70 microM) in a manner distinguishable from classical glycine and GABA(A) receptor antagonists.
  • TAG (250 microM) reduced the amplitude of glycinergic components which had a decay time constant of approximately 9 ms or approximately 230 ms by 45-50%, and a GABA(A)ergic component which had a decay time constant of approximately 40 ms by approximately 60%.
  • As in the glycinergic component, TAG reduced the amplitude of infrequently occurring, pure glycinergic IPSCs.
  • Surprisingly, TAG had no effect on pure GABA(A)ergic IPSCs, with a decay time constant of approximately 20 ms that correlated to kinetics of GABA-activated channels.
  • Overall, the effects of TAG implicate beta-amino acid involvement in GABA(A)ergic and glycinergic transmission.

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  • (PMID = 19332081.001).
  • [ISSN] 1873-7064
  • [Journal-full-title] Neuropharmacology
  • [ISO-abbreviation] Neuropharmacology
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Benzothiadiazines; 0 / Gabra4 protein, rat; 0 / Glra2 protein, rat; 0 / Protein Subunits; 0 / Receptors, GABA-A; 0 / Receptors, Glycine; 0 / glycine receptor alpha1; 11P2JDE17B / beta-Alanine; 1EQV5MLY3D / Taurine; 40709-69-1 / bicuculline methiodide; 80938-51-8 / 6-aminomethyl-3-methyl-4H-1,2,4-benzothiadiazine 1,1-dioxide; H030S2S85J / Kynurenic Acid; H9Y79VD43J / Strychnine; TE7660XO1C / Glycine; Y37615DVKC / Bicuculline
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27. Kendall WL, Conn PB, Hines JE: Combining multistate capture-recapture data with tag recoveries to estimate demographic parameters. Ecology; 2006 Jan;87(1):169-77

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Combining multistate capture-recapture data with tag recoveries to estimate demographic parameters.
  • At the same time, for many species, there are considerable tag recovery data provided by the public that could be modeled in order to increase precision and to extend inference to a greater number of areas or states.
  • Here we present a statistical model for combining multistate capture-recapture data (e.g., from a breeding ground study) with multistate tag recovery data (e.g., from wintering grounds).
  • Our analysis produced marginal improvement in precision, due to relatively few recoveries, but we demonstrate how precision could be further improved with increases in the probability that a retrieved tag is reported.

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  • (PMID = 16634308.001).
  • [ISSN] 0012-9658
  • [Journal-full-title] Ecology
  • [ISO-abbreviation] Ecology
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
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28. Watanabe S, Mizukami S, Hori Y, Kikuchi K: Multicolor protein labeling in living cells using mutant β-lactamase-tag technology. Bioconjug Chem; 2010 Dec 15;21(12):2320-6
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Multicolor protein labeling in living cells using mutant β-lactamase-tag technology.
  • Previously, we reported a novel protein labeling system based on the combination of a mutant β-lactamase (BL-tag) with coumarin-derivatized probes and its application to specific protein labeling on cell membranes.
  • In this paper, we demonstrated the broad applicability of our BL-tag technology to live cell imaging by the development of a series of fluorescence labeling probes for this technology, and the examination of the functions of target proteins.
  • These probes were used to specifically label the BL-tag protein and could be used with other small molecule fluorescent probes.
  • Highly specific and fast covalent labeling properties of this labeling technology is expected to provide robust tools for investigating protein functions in living cells, and future applications can be improved by combining the BL-tag technology with conventional imaging techniques.

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  • (PMID = 20961132.001).
  • [ISSN] 1520-4812
  • [Journal-full-title] Bioconjugate chemistry
  • [ISO-abbreviation] Bioconjug. Chem.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Bacterial Proteins; 0 / Coumarins; 0 / Fluorescent Dyes; 0 / Recombinant Fusion Proteins; 0 / Rhodamines; 147336-22-9 / Green Fluorescent Proteins; A4VZ22K1WT / coumarin; EC 3.5.2.6 / beta-Lactamases; TPY09G7XIR / Fluorescein
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29. Maldjian JA, Laurienti PJ, Burdette JH, Kraft RA: Clinical implementation of spin-tag perfusion magnetic resonance imaging. J Comput Assist Tomogr; 2008 May-Jun;32(3):403-6
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Clinical implementation of spin-tag perfusion magnetic resonance imaging.
  • Here, we describe a fully automated pipeline for clinical implementation of a magnetic resonance spin-tag perfusion sequence that can be extended to any studies requiring off-line processing.

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  • (PMID = 18520545.001).
  • [ISSN] 0363-8715
  • [Journal-full-title] Journal of computer assisted tomography
  • [ISO-abbreviation] J Comput Assist Tomogr
  • [Language] eng
  • [Grant] United States / NIBIB NIH HHS / EB / EB 004673; United States / NINDS NIH HHS / NS / NS 042568
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural
  • [Publication-country] United States
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30. Lovmar L, Syvänen AC: Genotyping single-nucleotide polymorphisms by minisequencing using tag arrays. Methods Mol Med; 2005;114:79-92

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Genotyping single-nucleotide polymorphisms by minisequencing using tag arrays.
  • Our system, presented here, combines the highly specific genotyping principle of minisequencing with the advantages of a microarray format that allows highly multiplexed and parallel analysis.
  • The detection primers carry unique 5' tag sequences and oligonucleotides complementary to the tag sequence, cTags, are immobilized on a microarray.

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  • (PMID = 16156098.001).
  • [ISSN] 1543-1894
  • [Journal-full-title] Methods in molecular medicine
  • [ISO-abbreviation] Methods Mol. Med.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
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31. Shen A, Lupardus PJ, Morell M, Ponder EL, Sadaghiani AM, Garcia KC, Bogyo M: Simplified, enhanced protein purification using an inducible, autoprocessing enzyme tag. PLoS One; 2009 Dec 02;4(12):e8119
eagle-i research resources. PMID 19956581 (Special Collections) .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Simplified, enhanced protein purification using an inducible, autoprocessing enzyme tag.
  • We introduce a new method for purifying recombinant proteins expressed in bacteria using a highly specific, inducible, self-cleaving protease tag.
  • This tag is comprised of the Vibrio cholerae MARTX toxin cysteine protease domain (CPD), an autoprocessing enzyme that cleaves exclusively after a leucine residue within the target protein-CPD junction.
  • This method condenses affinity chromatography and fusion tag cleavage into a single step, obviating the need for exogenous protease addition to remove the fusion tag(s) and increasing the efficiency of tag separation.

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  • (PMID = 19956581.001).
  • [ISSN] 1932-6203
  • [Journal-full-title] PloS one
  • [ISO-abbreviation] PLoS ONE
  • [Language] ENG
  • [Grant] United States / NIAID NIH HHS / AI / R01 AI078947; United States / NIBIB NIH HHS / EB / R01 EB005011; United States / NIAID NIH HHS / AI / T32 AI007328; United States / Howard Hughes Medical Institute / /
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / His-His-His-His-His-His; 0 / Oligopeptides; 0 / Protozoan Proteins; 0 / Recombinant Fusion Proteins; 4QD397987E / Histidine; EC 3.4.- / Peptide Hydrolases; EC 3.4.24.65 / Matrix Metalloproteinase 12; EC 6.2.1.- / Coenzyme A Ligases; EC 6.2.1.11 / biotin-CoA ligase
  • [Other-IDs] NLM/ PMC2780291
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32. Baldwin K, Namdari S, Andersen JR, Lee B, Itamura JM, Huffman GR: Luggage tag technique of anatomic fixation of displaced acromioclavicular joint separations. Clin Orthop Relat Res; 2010 Jan;468(1):259-65
MedlinePlus Health Information. consumer health - Shoulder Injuries and Disorders.

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Luggage tag technique of anatomic fixation of displaced acromioclavicular joint separations.
  • We present a modification of the anatomic fixation technique using a luggage tag method, which places a graft under the base of the coracoid.
  • We found the luggage tag technique provides anatomic fixation of the distal clavicle and restoration of coronal and sagittal plane stability to the injured acromioclavicular joint.

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  • (PMID = 19421827.001).
  • [ISSN] 1528-1132
  • [Journal-full-title] Clinical orthopaedics and related research
  • [ISO-abbreviation] Clin. Orthop. Relat. Res.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
  • [Other-IDs] NLM/ PMC2795829
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33. Stauber J, Ayed ME, Wisztorski M, Salzet M, Fournier I: Specific MALDI-MSI: Tag-Mass. Methods Mol Biol; 2010;656:339-61
MedlinePlus Health Information. consumer health - Diagnostic Imaging.

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Specific MALDI-MSI: Tag-Mass.
  • However, some limitations still exist due to physical and chemical aspects, and sensitivity of certain compounds is very low.
  • These techniques of targeted imaging using Tag-Mass molecules allow the multiplex detection of compounds like antibodies or oligonucleotides.

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  • (PMID = 20680601.001).
  • [ISSN] 1940-6029
  • [Journal-full-title] Methods in molecular biology (Clifton, N.J.)
  • [ISO-abbreviation] Methods Mol. Biol.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / RNA, Messenger
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34. Lenert LA, Palmer DA, Chan TC, Rao R: An Intelligent 802.11 Triage Tag for medical response to disasters. AMIA Annu Symp Proc; 2005;:440-4
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] An Intelligent 802.11 Triage Tag for medical response to disasters.
  • Paper triage tags are often used to mark victims' triage status and to record information on injuries and treatments administered in the field.
  • In this paper we describe the design and development of an"Intelligent Triage Tag" (ITT), an electronic device to coordinate patient field care.
  • ITTs combine the basic functionality of a paper triage tag with sensors, nonvolatile memory, a microprocessor and 802.11 wireless transmission capabilities.

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  • (PMID = 16779078.001).
  • [ISSN] 1942-597X
  • [Journal-full-title] AMIA ... Annual Symposium proceedings. AMIA Symposium
  • [ISO-abbreviation] AMIA Annu Symp Proc
  • [Language] ENG
  • [Grant] United States / NLM NIH HHS / LM / N01-LM-3-3511
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural
  • [Publication-country] United States
  • [Other-IDs] NLM/ PMC1560742
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35. Wang Z, Luque RM, Kineman RD, Ray VH, Christov KT, Lantvit DD, Shirai T, Hedayat S, Unterman TG, Bosland MC, Prins GS, Swanson SM: Disruption of growth hormone signaling retards prostate carcinogenesis in the Probasin/TAg rat. Endocrinology; 2008 Mar;149(3):1366-76
Hazardous Substances Data Bank. TESTOSTERONE .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Disruption of growth hormone signaling retards prostate carcinogenesis in the Probasin/TAg rat.
  • We asked whether down-regulation of GH signaling could block carcinogenesis in the Probasin/TAg rat, a model of aggressive prostate cancer.
  • The Spontaneous Dwarf rat, which lacks GH due to a mutation (dr) in its GH gene, was crossed with the Probasin/TAg rat, which develops prostate carcinomas at 100% incidence by 15 wk of age.
  • Progeny were heterozygous for the TAg oncogene and homozygous for either the wild-type GH gene (TAg/Gh(+/+)) or the dr mutation (TAg/Gh(dr/dr)).
  • Prostate tumor incidence and burden were significantly reduced, and tumor latency was delayed in TAg/Gh(dr/dr) rats relative to TAg/Gh(+/+) controls.
  • By 52 wk of age, invasive prostate adenocarcinomas were observed in all TAg/Gh(+/+) rats, whereas the majority of TAg/Gh(dr/dr) did not develop invasive tumors.
  • Suppression of carcinogenesis could not be attributed to alterations in prostate expression of TAg or androgen receptor or changes in serum testosterone levels.
  • As carcinogenesis progressed in TAg/Gh(+/+) rats, prostate GHR mRNA and protein expression increased significantly, but prostate IGF-I receptor mRNA and protein levels dropped.
  • These findings suggest that GH plays a dominant role in progression from latent to malignant prostate cancer driven by the powerful probasin/TAg fusion gene in rats and suggest that GH antagonists may be effective at treating human prostate cancer.

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  • (PMID = 18079205.001).
  • [ISSN] 0013-7227
  • [Journal-full-title] Endocrinology
  • [ISO-abbreviation] Endocrinology
  • [Language] ENG
  • [Grant] United States / NIDDK NIH HHS / DK / R01 DK040890; United States / NIA NIH HHS / AG / R03 AG020820
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Androgen-Binding Protein; 0 / Antigens, Viral, Tumor; 0 / RNA, Messenger; 0 / Receptors, Androgen; 0 / Receptors, Somatotropin; 0 / probasin; 3XMK78S47O / Testosterone; 67763-96-6 / Insulin-Like Growth Factor I; 9002-72-6 / Growth Hormone; EC 2.7.10.1 / Receptor, IGF Type 1
  • [Other-IDs] NLM/ PMC2275369
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36. Service S, International Collaborative Group on Isolated Populations, Sabatti C, Freimer N: Tag SNPs chosen from HapMap perform well in several population isolates. Genet Epidemiol; 2007 Apr;31(3):189-94
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Tag SNPs chosen from HapMap perform well in several population isolates.
  • This utility, however, largely depends on the transferability of tag SNPs chosen from reference samples, such as HapMap, to samples from such populations.
  • In this report, we show that tag SNPs chosen from HapMap perform well in several population isolates; this is true even for populations that differ substantially from the HapMap sample either in levels of linkage disequilibrium or in SNP allele frequency distributions.

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  • (PMID = 17323370.001).
  • [ISSN] 0741-0395
  • [Journal-full-title] Genetic epidemiology
  • [ISO-abbreviation] Genet. Epidemiol.
  • [Language] eng
  • [Grant] United States / NIMH NIH HHS / MH / MH001375; United States / NIMH NIH HHS / MH / MH049499; United States / NINDS NIH HHS / NS / NS037484; United States / NINDS NIH HHS / NS / NS040024
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural
  • [Publication-country] United States
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37. Cowen L, Schwarz CJ: The Jolly-Seber model with tag loss. Biometrics; 2006 Sep;62(3):699-705
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] The Jolly-Seber model with tag loss.
  • Tag loss in mark-recapture experiments is a violation of one of the Jolly-Seber model assumptions.
  • We develop methodology to estimate tag retention and abundance in double-tagging mark-recapture experiments.

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  • (PMID = 16984310.001).
  • [ISSN] 0006-341X
  • [Journal-full-title] Biometrics
  • [ISO-abbreviation] Biometrics
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
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38. Lee B, Riche NH, Karlson AK, Carpendale S: SparkClouds: visualizing trends in tag clouds. IEEE Trans Vis Comput Graph; 2010 Nov-Dec;16(6):1182-9

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] SparkClouds: visualizing trends in tag clouds.
  • Tag clouds have proliferated over the web over the last decade.
  • They provide a visual summary of a collection of texts by visually depicting the tag frequency by font size.
  • In use, tag clouds can evolve as the associated data source changes over time.
  • Interesting discussions around tag clouds often include a series of tag clouds and consider how they evolve over time.
  • However, since tag clouds do not explicitly represent trends or support comparisons, the cognitive demands placed on the person for perceiving trends in multiple tag clouds are high.
  • In this paper, we introduce SparkClouds, which integrate sparklines into a tag cloud to convey trends between multiple tag clouds.
  • We present results from a controlled study that compares SparkClouds with two traditional trend visualizations—multiple line graphs and stacked bar charts—as well as Parallel Tag Clouds.

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  • (PMID = 20975157.001).
  • [ISSN] 1077-2626
  • [Journal-full-title] IEEE transactions on visualization and computer graphics
  • [ISO-abbreviation] IEEE Trans Vis Comput Graph
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
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39. Häussinger D, Huang JR, Grzesiek S: DOTA-M8: An extremely rigid, high-affinity lanthanide chelating tag for PCS NMR spectroscopy. J Am Chem Soc; 2009 Oct 21;131(41):14761-7
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] DOTA-M8: An extremely rigid, high-affinity lanthanide chelating tag for PCS NMR spectroscopy.
  • A new lanthanide chelating tag (M8) for paramagnetic labeling of biomolecules is presented, which is based on an eight-fold, stereoselectively methyl-substituted DOTA that can be covalently linked to the host molecule by a single disulfide bond.
  • Its steric bulk restricts the motion of the tag relative to the host molecule.
  • These properties result in very large pseudocontact shifts (>5 ppm) and residual dipolar couplings (>20 Hz) for Dy-M8 linked to ubiquitin, which are unprecedented for a small, single-point-attachment tag.
  • Due to its exceptionally high stability and lanthanide affinity M8 can be used under extreme chemical or physical conditions, such as those applied for protein denaturation, or when it is undesirable that buffer or protein react with excess lanthanide ions.

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  • (PMID = 19785413.001).
  • [ISSN] 1520-5126
  • [Journal-full-title] Journal of the American Chemical Society
  • [ISO-abbreviation] J. Am. Chem. Soc.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Chelating Agents; 0 / Heterocyclic Compounds, 1-Ring; 0 / Lanthanoid Series Elements; 0 / Ubiquitin; 60239-18-1 / 1,4,7,10-tetraazacyclododecane- 1,4,7,10-tetraacetic acid; 8W8T17847W / Urea
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40. Xu Z, Kaplan NL, Taylor JA: TAGster: efficient selection of LD tag SNPs in single or multiple populations. Bioinformatics; 2007 Dec 1;23(23):3254-5
COS Scholar Universe. author profiles.

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] TAGster: efficient selection of LD tag SNPs in single or multiple populations.
  • Genetic association studies increasingly rely on the use of linkage disequilibrium (LD) tag SNPs to reduce genotyping costs.
  • We developed a software package TAGster to select, evaluate and visualize LD tag SNPs both for single and multiple populations.
  • We implement several strategies to improve the efficiency of current LD tag SNP selection algorithms:.
  • (1) we modify the tag SNP selection procedure of Carlson et al. to improve selection efficiency and further generalize it to multiple populations. (2) We propose a redundant SNP elimination step to speed up the exhaustive tag SNP search algorithm proposed by Qin et al. (3) We present an additional multiple population tag SNP selection algorithm based on the framework of Howie et al., but using our modified exhaustive search procedure.
  • [MeSH-major] Chromosome Mapping / methods. Expressed Sequence Tags. Genetic Markers / genetics. Genetics, Population. Linkage Disequilibrium / genetics. Polymorphism, Single Nucleotide / genetics. Sequence Analysis, DNA / methods

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  • (PMID = 17827206.001).
  • [ISSN] 1367-4811
  • [Journal-full-title] Bioinformatics (Oxford, England)
  • [ISO-abbreviation] Bioinformatics
  • [Language] eng
  • [Grant] United States / Intramural NIH HHS / / Z01 ES049033-11; United States / Intramural NIH HHS / / Z99 ES999999
  • [Publication-type] Journal Article; Research Support, N.I.H., Intramural
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Genetic Markers
  • [Other-IDs] NLM/ NIHMS87942; NLM/ PMC2782964
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41. Freydank AC, Brandt W, Dräger B: Protein structure modeling indicates hexahistidine-tag interference with enzyme activity. Proteins; 2008 Jul;72(1):173-83
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Protein structure modeling indicates hexahistidine-tag interference with enzyme activity.
  • Unusual kinetic characteristics of tropinone reductase, an enzyme in the family of short chain dehydrogenases, prompted to investigate a possible impact of the hexahistidine affinity tag on catalytic properties.
  • Comparison of enzymes from Solanum dulcamara, Solanaceae, tagged at the N-terminus or at the C-terminus revealed that the C-terminally tagged form was functionally impaired.
  • Protein modeling indicated that the hexahistidine tag attached at the C-terminus but not at the N-terminus of the polypeptide can interfere with the active site by steric or electrostatic interactions.
  • In consequence, protein modeling is suggested before enzyme expression with affinity tags to estimate possible interactions of affinity tags with the active center.

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  • [Copyright] 2008 Wiley-Liss, Inc.
  • (PMID = 18214963.001).
  • [ISSN] 1097-0134
  • [Journal-full-title] Proteins
  • [ISO-abbreviation] Proteins
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / His-His-His-His-His-His; 0 / Oligopeptides; 0 / Tropanes; 0 / calystegin; 4QD397987E / Histidine; EC 1.1.- / Alcohol Oxidoreductases; EC 1.1.1.236 / tropinone reductase
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42. Käller M, Hultin E, Zheng B, Gharizadeh B, Wallin KL, Lundeberg J, Ahmadian A: Tag-array based HPV genotyping by competitive hybridization and extension. J Virol Methods; 2005 Nov;129(2):102-12
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Tag-array based HPV genotyping by competitive hybridization and extension.
  • The 46 type-specific oligonucleotides each had a unique tag sequence to allow detection via an array of oligonucleotides complementary to the tags.

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  • (PMID = 15979736.001).
  • [ISSN] 0166-0934
  • [Journal-full-title] Journal of virological methods
  • [ISO-abbreviation] J. Virol. Methods
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] Netherlands
  • [Chemical-registry-number] 0 / DNA Primers; EC 3.6.1.5 / Apyrase
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43. Simas RC, Catharino RR, Cunha IB, Cabral EC, Barrera-Arellano D, Eberlin MN, Alberici RM: Instantaneous characterization of vegetable oils via TAG and FFA profiles by easy ambient sonic-spray ionization mass spectrometry. Analyst; 2010 Apr;135(4):738-44
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Instantaneous characterization of vegetable oils via TAG and FFA profiles by easy ambient sonic-spray ionization mass spectrometry.
  • Easy ambient sonic-spray ionization mass spectrometry (EASI-MS) is shown to efficiently desorb and ionize the main oil constituents from an inert surface under ambient conditions and to provide comprehensive triacylglyceride (TAG) and free fatty acid (FFA) profiles detected mainly as either [TAG + Na](+) or [FFA-H](-) ions.
  • It also causes no fragmentation of TAG ions hence diacylglyceride (DAG) and monoacylglyceride (MAG) profiles and contents can also be measured.
  • The EASI(+/-)-MS profiles of TAG and FFA permit authentication and quality control and can be used, for instance, to access levels of adulteration, acidity, oxidation or hydrolysis of vegetable oils in general.

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  • (PMID = 20349539.001).
  • [ISSN] 1364-5528
  • [Journal-full-title] The Analyst
  • [ISO-abbreviation] Analyst
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Fatty Acids; 0 / Plant Oils; 0 / Triglycerides
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44. Smits SH, Mueller A, Grieshaber MK, Schmitt L: Coenzyme- and His-tag-induced crystallization of octopine dehydrogenase. Acta Crystallogr Sect F Struct Biol Cryst Commun; 2008 Sep 1;64(Pt 9):836-9
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Coenzyme- and His-tag-induced crystallization of octopine dehydrogenase.
  • Over the last decade, protein purification has become more efficient and standardized through the introduction of affinity tags.
  • The choice and position of the tag, however, can directly influence the process of protein crystallization.
  • Octopine dehydrogenase (OcDH) without a His tag and tagged protein constructs such as OcDH-His(5) and OcDH-LEHis(6) have been investigated for their crystallizability.
  • As shown by the structure, the His(5) tag protrudes into the cleft between the NADH and L-arginine-binding domains and is mainly fixed in place by water molecules.
  • Together with NADH, the His(5) tag obviously locks the enzyme into a specific conformation which induces crystal growth.

  • Hazardous Substances Data Bank. (L)-HISTIDINE .
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  • [Cites] J Biol Chem. 1988 May 25;263(15):7211-5 [3284883.001]
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  • (PMID = 18765918.001).
  • [ISSN] 1744-3091
  • [Journal-full-title] Acta crystallographica. Section F, Structural biology and crystallization communications
  • [ISO-abbreviation] Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Coenzymes; 0 / Recombinant Proteins; 4QD397987E / Histidine; EC 1.4.- / Amino Acid Oxidoreductases; EC 1.5.1.11 / D-octopine dehydrogenase
  • [Other-IDs] NLM/ PMC2531259
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45. Zhang K, Qin Z, Chen T, Liu JS, Waterman MS, Sun F: HapBlock: haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms. Bioinformatics; 2005 Jan 1;21(1):131-4
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] HapBlock: haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms.
  • Such LD patterns make it possible to select a set of single nucleotide polymorphism (SNPs; tag SNPs) for genome-wide association studies.
  • We have developed a suite of computer programs to analyze the block-like LD patterns and to select the corresponding tag SNPs.
  • Compared to other programs for haplotype block partitioning and tag SNP selection, our program has several notable features.
  • First, the dynamic programming algorithms implemented are guaranteed to find the block partition with minimum number of tag SNPs for the given criteria of blocks and tag SNPs.
  • Third, several existing measures/criteria for haplotype block partitioning and tag SNP selection have been implemented in the program.
  • Finally, the programs provide flexibility to include specific SNPs (e.g. non-synonymous SNPs) as tag SNPs.
  • [MeSH-minor] Expressed Sequence Tags. Genetic Variation

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  • (PMID = 15333454.001).
  • [ISSN] 1367-4803
  • [Journal-full-title] Bioinformatics (Oxford, England)
  • [ISO-abbreviation] Bioinformatics
  • [Language] eng
  • [Grant] United States / NHGRI NIH HHS / HG / P50 HG 002790; United States / NHGRI NIH HHS / HG / R01-HG02518; United States / NIEHS NIH HHS / ES / R01ES09912; United States / NCRR NIH HHS / RR / RR16522; United States / NCI NIH HHS / CA / U54CA100949
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, U.S. Gov't, P.H.S.
  • [Publication-country] England
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46. Gautier A, Juillerat A, Heinis C, Corrêa IR Jr, Kindermann M, Beaufils F, Johnsson K: An engineered protein tag for multiprotein labeling in living cells. Chem Biol; 2008 Feb;15(2):128-36
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] An engineered protein tag for multiprotein labeling in living cells.
  • We have previously introduced the SNAP-tag as a general tool for the specific labeling of SNAP-tag fusion proteins in living cells.
  • The SNAP-tag is derived from the human DNA repair protein O6-alkylguanine-DNA alkyltransferase (AGT) and can be covalently labeled in living cells using O6-benzylguanine derivatives bearing a chemical probe.
  • Here we report the generation of an AGT-based tag, named CLIP-tag, which reacts specifically with O2-benzylcytosine derivatives.
  • Because SNAP-tag and CLIP-tag possess orthogonal substrate specificities, SNAP and CLIP fusion proteins can be labeled simultaneously and specifically with different molecular probes in living cells.


47. Cai Y, Li XC, Wu XM, Wang N, Cao HW, Wei G, Zhao KC, Zheng K, Zheng J, Li Y: [Identification of HBV genotype-specific tag sequences]. Zhonghua Gan Zang Bing Za Zhi; 2010 Feb;18(2):101-4

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] [Identification of HBV genotype-specific tag sequences].
  • OBJECTIVE: To identify the HBV genotype-specific tag sequence.
  • METHODS: The large S region sequences from 930 HBV genomes were aligned to identify the genotype-specific tag sequences.
  • PCR was used to check the genotyping effect of these tags.
  • RESULTS: Two tag sequences, sequence between 149-169 and sequence between 461-483, were identified in the large S region.
  • Using primers specific to these tag sequences, the genotype of HBV can be specifically identified.
  • CONCLUSION: These tag sequences can be used for HBV genotyping.

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  • (PMID = 20196947.001).
  • [ISSN] 1007-3418
  • [Journal-full-title] Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology
  • [ISO-abbreviation] Zhonghua Gan Zang Bing Za Zhi
  • [Language] chi
  • [Publication-type] English Abstract; Journal Article
  • [Publication-country] China
  • [Chemical-registry-number] 0 / DNA Primers; 0 / Protein Precursors
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48. Kim YC, Jung YC, Xuan Z, Dong H, Zhang MQ, Wang SM: Pan-genome isolation of low abundance transcripts using SAGE tag. FEBS Lett; 2006 Dec 11;580(28-29):6721-9
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Pan-genome isolation of low abundance transcripts using SAGE tag.
  • More than a third of human SAGE tags identified are novel representing the low abundance unknown transcripts.
  • Using the GLGI method (generation of longer 3' EST from SAGE tag for gene identification), we converted 1009 low-copy, human X chromosome-specific SAGE tags into 10210 3' ESTs.
  • Detailed analysis indicates that those 3' ESTs were isolated by SAGE tag mis-priming to the non-parent transcripts.
  • Replacing SAGE tags with non-transcribed genomic DNA tags resulted in poor amplification, indicating that the sequence similarity between different transcripts contributed to the amplification.
  • Our study shows the prevalence of novel low abundance transcripts that can be isolated efficiently through SAGE tags mis-priming.

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  • (PMID = 17113583.001).
  • [ISSN] 0014-5793
  • [Journal-full-title] FEBS letters
  • [ISO-abbreviation] FEBS Lett.
  • [Language] ENG
  • [Grant] United States / NHGRI NIH HHS / HG / R01 HG002600; United States / NHGRI NIH HHS / HG / HG002600
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
  • [Publication-country] England
  • [Chemical-registry-number] 0 / RNA, Messenger
  • [Other-IDs] NLM/ NIHMS14778; NLM/ PMC1791009
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49. Makaroun MS, Dillavou ED, Wheatley GH, Cambria RP, Gore TAG Investigators: Five-year results of endovascular treatment with the Gore TAG device compared with open repair of thoracic aortic aneurysms. J Vasc Surg; 2008 May;47(5):912-8
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Five-year results of endovascular treatment with the Gore TAG device compared with open repair of thoracic aortic aneurysms.
  • OBJECTIVES: Report the results of a phase II multicenter, prospective trial comparing endovascular treatment of descending thoracic aneurysm (TEVAR) with the TAG device to surgical controls after 5 years of follow-up.
  • METHODS: The Gore TAG trial compared the TAG endograft patients (n = 140) with standard open surgical controls (n = 94) with enrollment from September of 1999 to May of 2001.
  • RESULTS: At 5 years, aneurysm-related mortality was lower for TAG patients at 2.8% compared with open controls at 11.7% (P = .008).
  • No differences in all-cause mortality were noted, with 68% of TAG patients and 67% of open controls surviving to 5 years (P = .43).
  • Major adverse events at 5 years were significantly reduced in the TAG group; 57.9% vs 78.7% (P = .001).
  • Endoleaks in the TAG group decreased from 8.1% at 1 month to 4.3% at 5 years.
  • Five TAG patients have undergone major aneurysm-related re-interventions at 5 years (3.6%), including one arch aneurysm repair for type 1 endoleak and migration, one open conversion and five endovascular procedures for endoleaks in three patients.
  • There were fewer secondary procedures not directly related to aneurysm repair in the TAG vs the open repair group at 5 years, 15.0% vs 31.9%, (P = .01).
  • For TAG patients, sac size at 60 months decreased in 50% and increased in 19% compared with the 1-month baseline.
  • At 5 years, there have been no ruptures, one migration, no collapse, and 20 instances of fracture in 19 patients, all before the revision of the TAG graft.
  • CONCLUSIONS: In anatomically suitable patients, TAG treatment of thoracic aneurysms is superior to surgical repair at 5 years.

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  • (PMID = 18353605.001).
  • [ISSN] 0741-5214
  • [Journal-full-title] Journal of vascular surgery
  • [ISO-abbreviation] J. Vasc. Surg.
  • [Language] eng
  • [Publication-type] Clinical Trial, Phase II; Comparative Study; Journal Article; Multicenter Study
  • [Publication-country] United States
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50. Spector L, Klein J: Genetic stability and territorial structure facilitate the evolution of tag-mediated altruism. Artif Life; 2006;12(4):553-60
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Genetic stability and territorial structure facilitate the evolution of tag-mediated altruism.
  • Recent work has demonstrated that altruistic donation can evolve in surprisingly simple models, in which agents base their decisions to donate solely on the similarity of evolved "tags" relative to evolved tag-difference tolerances.
  • There is disagreement, however, about the conditions under which tag-mediated altruism will in fact evolve.
  • Here we vary two critical parameters in a standard model of tag-mediated altruism-genetic stability and territorial structure-and show that altruism evolves in a wide range of conditions.

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  • (PMID = 16953785.001).
  • [ISSN] 1064-5462
  • [Journal-full-title] Artificial life
  • [ISO-abbreviation] Artif. Life
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
  • [Publication-country] United States
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51. Tanimoto J: Does a tag system effectively support emerging cooperation? J Theor Biol; 2007 Aug 21;247(4):756-64
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Does a tag system effectively support emerging cooperation?
  • This paper investigates whether the so-called Tag Systems support emerging cooperation with respect to 2x2 games.
  • The Tag System, initially proposed by Riolo et al. [2001.
  • Nature 414, 441-443], gives each agent both a Tag and Tol defined by [0,1] real numbers.
  • Both Tag and Tol are assumed to be evolving.
  • Results show that the tag's effectiveness depends on whether the AllD strategy is allowed in the system.
  • Thus, (1) the tag's effectiveness is more meager than that reported by Riolo et al., (2) the Tag System can use alternating reciprocity more effectively than the analytic solution in a Hero game;.
  • (3) a system using a 2D tag space supports cooperation more effectively than the usual Tag System.

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  • (PMID = 17507033.001).
  • [ISSN] 0022-5193
  • [Journal-full-title] Journal of theoretical biology
  • [ISO-abbreviation] J. Theor. Biol.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] Netherlands
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52. Shindo A, Matsuda A, Tani S, Marukami T, Fujimaru K, Yagi Y, Horio H, Inada H: Construction of a safety management system for drug use by using an RFID tag. Stud Health Technol Inform; 2006;122:770
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Construction of a safety management system for drug use by using an RFID tag.
  • We constructed a safety management system for narcotic drug use by using an RFID tag with barcode.
  • In this system, RFID tags are mainly used for postscript of information, while barcodes, especially standardized unit drug codes for distribution, are used for drug identification.

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  • (PMID = 17102371.001).
  • [ISSN] 0926-9630
  • [Journal-full-title] Studies in health technology and informatics
  • [ISO-abbreviation] Stud Health Technol Inform
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] Netherlands
  • [Chemical-registry-number] 0 / Narcotics
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53. Tagwerker C, Zhang H, Wang X, Larsen LS, Lathrop RH, Hatfield GW, Auer B, Huang L, Kaiser P: HB tag modules for PCR-based gene tagging and tandem affinity purification in Saccharomyces cerevisiae. Yeast; 2006 Jun;23(8):623-32
eagle-i research resources. PMID 16823883 (Special Collections) .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] HB tag modules for PCR-based gene tagging and tandem affinity purification in Saccharomyces cerevisiae.
  • We have recently developed the HB tag as a useful tool for tandem-affinity purification under native as well as fully denaturing conditions.
  • The HB tag and its derivatives consist of a hexahistidine tag and a bacterially-derived in vivo biotinylation signal peptide, which support sequential purification by Ni2+ -chelate chromatography and binding to immobilized streptavidin.
  • To facilitate tagging of budding yeast proteins with HB tags, we have created a series of plasmids with various selectable markers.
  • HB tagging of several budding yeast ORFs demonstrated efficient biotinylation of the HB tag in vivo by endogenous yeast biotin ligases.
  • No adverse effects of the HB tag on protein function were observed.

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  • Addgene Non-profit plasmid repository. clones/clone libraries - Get Article's Plasmids - Addgene (subscription/membership/fee required).
  • Hazardous Substances Data Bank. BIOTIN .
  • Hazardous Substances Data Bank. (L)-HISTIDINE .
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  • [Copyright] Copyright 2006 John Wiley & Sons, Ltd.
  • (PMID = 16823883.001).
  • [ISSN] 0749-503X
  • [Journal-full-title] Yeast (Chichester, England)
  • [ISO-abbreviation] Yeast
  • [Language] eng
  • [Databank-accession-numbers] GENBANK/ DQ407918/ DQ407919/ DQ407920/ DQ407921/ DQ407922/ DQ407923/ DQ407924/ DQ407925/ DQ407926/ DQ407927/ DQ407928/ DQ407929/ DQ407930/ DQ407931
  • [Grant] United States / NIGMS NIH HHS / GM / GM66164; United States / NIGMS NIH HHS / GM / GM68903; United States / NIGMS NIH HHS / GM / GM74830; United States / NLM NIH HHS / LM / T15LM07443
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
  • [Publication-country] England
  • [Chemical-registry-number] 0 / DNA Primers; 0 / DNA, Fungal; 0 / Epitopes; 0 / His-His-His-His-His-His; 0 / Oligopeptides; 0 / Saccharomyces cerevisiae Proteins; 4QD397987E / Histidine; 6SO6U10H04 / Biotin
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54. Mäkitie AA, Pintor Dos Reis P, Arora S, Macmillan C, Warner GC, Sukhai M, Dardick I, Perez-Ordonez B, Wells R, Brown D, Gilbert R, Freeman J, Gullane P, Irish J, Kamel-Reid S: Molecular characterization of salivary gland malignancy using the Smgb-Tag transgenic mouse model. Lab Invest; 2005 Aug;85(8):947-61
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Molecular characterization of salivary gland malignancy using the Smgb-Tag transgenic mouse model.
  • In order to identify genetic changes that occur during the development of invasive adenocarcinoma from normal salivary gland, we used the Smgb-Tag transgenic mouse model.
  • Immunohistochemical analysis was used to validate the expression of Ptn and Cd24a at the protein level in a subset of 16 mouse salivary glands (four normal, five dysplasia and seven adenocarcinoma samples), as well as in 23 human submandibular gland tumors (16 pleomorphic adenomas, three adenoid cystic carcinomas, one acinic cell carcinoma, one adenocarcinoma NOS, one myoepithelial and one mucoepidermoid carcinoma).
  • We thus demonstrated that the Smgb-Tag transgenic mouse model is a useful tool for the identification of genes that are deregulated in salivary gland adenocarcinomas.

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  • (PMID = 15880136.001).
  • [ISSN] 0023-6837
  • [Journal-full-title] Laboratory investigation; a journal of technical methods and pathology
  • [ISO-abbreviation] Lab. Invest.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
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55. Hassouneh W, Christensen T, Chilkoti A: Elastin-like polypeptides as a purification tag for recombinant proteins. Curr Protoc Protein Sci; 2010 Aug;Chapter 6:Unit 6.11
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Elastin-like polypeptides as a purification tag for recombinant proteins.
  • This unit presents a recombinant protein purification method that employs an elastin-like polypeptide (ELP) as a purification tag.

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  • (PMID = 20814933.001).
  • [ISSN] 1934-3663
  • [Journal-full-title] Current protocols in protein science
  • [ISO-abbreviation] Curr Protoc Protein Sci
  • [Language] ENG
  • [Grant] United States / NIGMS NIH HHS / GM / GM061232-11; United States / NIGMS NIH HHS / GM / R01 GM061232; United States / NIGMS NIH HHS / GM / R01 GM061232-11
  • [Publication-type] Journal Article
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Peptides; 0 / Recombinant Fusion Proteins; 9007-58-3 / Elastin
  • [Other-IDs] NLM/ NIHMS251249; NLM/ PMC3076942
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56. Min W, Lillehoj HS, Ashwell CM, van Tassell CP, Dalloul RA, Matukumalli LK, Han JY, Lillehoj EP: Expressed sequence tag analysis of Eimeria-stimulated intestinal intraepithelial lymphocytes in chickens. Mol Biotechnol; 2005 Jun;30(2):143-50
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Expressed sequence tag analysis of Eimeria-stimulated intestinal intraepithelial lymphocytes in chickens.
  • A list of genes expressed by intestinal IELs of Eimeria-infected chickens was compiled using the expressed sequence tag (EST) strategy.
  • [MeSH-major] Chickens / parasitology. Coccidiosis / veterinary. Eimeria. Expressed Sequence Tags. Intestinal Mucosa / immunology. Lymphocytes / metabolism. Poultry Diseases / parasitology

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  • (PMID = 15920284.001).
  • [ISSN] 1073-6085
  • [Journal-full-title] Molecular biotechnology
  • [ISO-abbreviation] Mol. Biotechnol.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Interleukin-16; 0 / Interleukin-17
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57. Carrel FR, Seeberger PH: Cap-and-tag solid phase oligosaccharide synthesis. J Org Chem; 2008 Mar 21;73(6):2058-65
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  • [Title] Cap-and-tag solid phase oligosaccharide synthesis.
  • A new "cap-and-tag" strategy is applied to solid phase oligosaccharide synthesis.

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  • (PMID = 17956118.001).
  • [ISSN] 0022-3263
  • [Journal-full-title] The Journal of organic chemistry
  • [ISO-abbreviation] J. Org. Chem.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Glycosides; 0 / Oligosaccharides; IY9XDZ35W2 / Glucose; PHA4727WTP / Mannose
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58. Hao K: Genome-wide selection of tag SNPs using multiple-marker correlation. Bioinformatics; 2007 Dec 1;23(23):3178-84
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  • [Title] Genome-wide selection of tag SNPs using multiple-marker correlation.
  • MOTIVATIONS: The tag SNP approach is a valuable tool in whole genome association studies, and a variety of algorithms have been proposed to identify the optimal tag SNP set.
  • Currently, most tag SNP selection is based on two-marker (pairwise) linkage disequilibrium (LD).
  • Recent literature has shown that multiple-marker LD also contains useful information that can further increase the genetic coverage of the tag SNP set.
  • Thus, tag SNP selection methods that incorporate multiple-marker LD are expected to have advantages in terms of genetic coverage and statistical power.
  • RESULTS: We propose a novel algorithm to select tag SNPs in an iterative procedure.
  • In each iteration loop, the SNP that captures the most neighboring SNPs (through pair-wise and multiple-marker LD) is selected as a tag SNP.
  • Benchmarked using HapMap release 21, our algorithm outperforms standard pair-wise LD approach in several aspects. (i) It improves genetic coverage (e.g. by 7.2% for 200 K tag SNPs in HapMap CEU) compared to its conventional pair-wise counterpart, when conditioning on a fixed tag SNP number. (ii) It saves genotyping costs substantially when conditioning on fixed genetic coverage (e.g.
  • 34.1% saving in HapMap CEU at 90% coverage). (iii) Tag SNPs identified using multiple-marker LD have good portability across closely related ethnic groups and (iv) show higher statistical power in association tests than those selected using conventional methods.
  • [MeSH-major] Algorithms. Chromosome Mapping / methods. Expressed Sequence Tags. Genetic Markers / genetics. Linkage Disequilibrium / genetics. Polymorphism, Single Nucleotide / genetics. Sequence Analysis, DNA / methods

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  • (PMID = 18006555.001).
  • [ISSN] 1367-4811
  • [Journal-full-title] Bioinformatics (Oxford, England)
  • [ISO-abbreviation] Bioinformatics
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Genetic Markers
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59. Eng B, Walker L, Waye JS: Alpha+-thalassemia trait caused by a nonsense mutation in the alpha2-globin gene: codon 54 (CAG>TAG). Hemoglobin; 2009;33(1):72-4
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  • [Title] Alpha+-thalassemia trait caused by a nonsense mutation in the alpha2-globin gene: codon 54 (CAG>TAG).
  • Sequence analysis identified a nonsense mutation in exon 2 of the alpha2-globin gene, at amino acid codon 54 (CAG>TAG).


60. Naumann TA, Savinov SN, Benkovic SJ: Engineering an affinity tag for genetically encoded cyclic peptides. Biotechnol Bioeng; 2005 Dec 30;92(7):820-30
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Engineering an affinity tag for genetically encoded cyclic peptides.
  • Here, we describe development, application, and the first-generation library implementation of an expressed affinity tag for a library of cyclic peptides.
  • A resulting peptide was employed as a sensitive indicator of peptide splicing, expression, and recovery as well as an affinity tag for one-step purification.
  • Specific recognition of the tag by streptavidin was also critical for an analysis of intein mutants.
  • Finally, the initially identified probe was used as a template for design of a streptavidin-responsive cyclic peptide library.

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  • [Copyright] Copyright 2005 Wiley Periodicals, Inc
  • (PMID = 16155946.001).
  • [ISSN] 0006-3592
  • [Journal-full-title] Biotechnology and bioengineering
  • [ISO-abbreviation] Biotechnol. Bioeng.
  • [Language] eng
  • [Grant] United States / NIGMS NIH HHS / GM / 5F32GM068267-02
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Peptide Library; 0 / Peptides, Cyclic; 9013-20-1 / Streptavidin
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61. Calvo A, Perez-Stable C, Segura V, Catena R, Guruceaga E, Nguewa P, Blanco D, Parada L, Reiner T, Green JE: Molecular characterization of the Ggamma-globin-Tag transgenic mouse model of hormone refractory prostate cancer: comparison to human prostate cancer. Prostate; 2010 May 1;70(6):630-45
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  • [Title] Molecular characterization of the Ggamma-globin-Tag transgenic mouse model of hormone refractory prostate cancer: comparison to human prostate cancer.
  • METHODS: We have analyzed the transcriptome of the hormone refractory and highly metastatic Fetal Globin-SV40/T-antigen (Ggamma-globin-Tag) transgenic mouse model for PrCa compared to normal mouse prostate tissue.
  • Gene expression patterns found in Ggamma-globin-Tag mouse prostate tumors were compared with publicly available human localized and metastatic prostate tumors (GEO accession # GSE3325) through hierarchical cluster analysis, Pearson's rank correlation coefficient, and Self Organizing Feature Maps (SOM) analyses.
  • RESULTS: Ggamma-globin-Tag tumors clustered closely with human metastatic tumors and gene expression patterns had a significant correlation (P < 0.01), unlike human localized primary tumors (P > 0.6).
  • Bioinformatic analyses identified deregulated genetic pathways and networks in Ggamma-globin-Tag tumors, which displayed similarities to alterations in human PrCa.
  • Changes in the expression of genes involved in DNA replication and repair (Rb1, p53, Myc, PCNA, DNMT3A) and growth factor signaling pathways (TGFbeta2, ERK1/2, NRas, and Notch1) are deregulated in the Ggamma-globin-Tag tumors, suggesting their key role in the oncogenic process.
  • Identification of an enrichment of putative binding sites for transcription factors revealed eight transcription factors that may be important in Ggamma-globin-Tag carcinogenesis, including SP1, NF-Y, CREB, Elk1, and E2F.
  • Novel genes related to microtubule regulation were also identified in Ggamma-globin-Tag tumors as potentially important candidate targets for PrCa.
  • Overexpression of stathmin-1, whose expression was increased in human metastatic prostate tumors, was validated in Ggamma-globin-Tag tumors by immunohistochemistry.
  • CONCLUSIONS: Our results show that the Ggamma-globin-Tag model for hormone refractory PrCa shares important features with aggressive, metastatic human PrCa.
  • Given the role of stathmin-1 in the destabilization of microtubles and taxane resistance, the Ggamma-globin-Tag model and other SV40/T-antigen driven transgenic models may be useful for testing potential therapies directed at stathmin-1 in human prostate tumors.


62. Huang YT, Chao KM: A new framework for the selection of tag SNPs by multimarker haplotypes. J Biomed Inform; 2008 Dec;41(6):953-61
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] A new framework for the selection of tag SNPs by multimarker haplotypes.
  • This paper proposes a new framework for the selection of tag SNPs based on haplotypes instead of on a single SNP.
  • The tag SNPs found by this framework form a set of haplotypes completely predictive of the alleles of all untyped SNPs.
  • We refer to this problem as MTMH, which is defined as follows: given a set of SNPs, find a minimum subset of SNPs (called tag SNPs) which defines a set of haplotypes completely predictive of the alleles of all untyped SNPs.
  • We describe a framework which integrates these algorithms and develop a program called HapTagger for finding tag SNPs.
  • Our theoretical analysis and experimental results indicate that HapTagger consistently identifies a smaller set of tag SNPs and runs much faster than existing methods.

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  • (PMID = 18490200.001).
  • [ISSN] 1532-0480
  • [Journal-full-title] Journal of biomedical informatics
  • [ISO-abbreviation] J Biomed Inform
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Genetic Markers
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63. Peyser BD, Irizarry R, Spencer FA: Statistical analysis of fitness data determined by TAG hybridization on microarrays. Methods Mol Biol; 2008;416:369-81
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  • [Title] Statistical analysis of fitness data determined by TAG hybridization on microarrays.
  • TAG, or bar-code, microarrays allow measurement of the oligonucleotide sequences (TAGs) that mark each strain of deletion mutants in the Saccharomyces cerevisiae yeast knockout (YKO) collection.
  • Comparison of genomic DNA from pooled YKO samples allows estimation of relative abundance of TAGs marking each deletion strain.
  • Features of TAG hybridizations create unique challenges for analysis.
  • Analysis is complicated by the presence of two TAGs in most YKO strains and the hybridization behavior of TAGs that may differ in sequence from array probes.
  • The oligonucleotide size of labeled TAGs also results in difficulty with contaminating sequences that cause reduced specificity.
  • We present methods for analysis that approach these unique features of TAG hybridizations.

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  • (PMID = 18392981.001).
  • [ISSN] 1064-3745
  • [Journal-full-title] Methods in molecular biology (Clifton, N.J.)
  • [ISO-abbreviation] Methods Mol. Biol.
  • [Language] eng
  • [Grant] United States / NIGMS NIH HHS / GM / GM 007445; United States / NIGMS NIH HHS / GM / GM 62368; United States / NHGRI NIH HHS / HG / HG 02432
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / DNA Probes
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64. Mao CY, Gu XH: [Effect of different irrigants on radicular dentin cleansing and resin tag formation after post space preparation]. Hua Xi Kou Qiang Yi Xue Za Zhi; 2010 Jun;28(3):237-40
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  • [Title] [Effect of different irrigants on radicular dentin cleansing and resin tag formation after post space preparation].
  • The left two specimens were restored with fiber posts and prepared for evaluation of resin tag formation.
  • Resin tag formation differed between the three irrigant groups, and group B showed excellent resin tag formation.

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  • (PMID = 20635647.001).
  • [ISSN] 1000-1182
  • [Journal-full-title] Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology
  • [ISO-abbreviation] Hua Xi Kou Qiang Yi Xue Za Zhi
  • [Language] chi
  • [Publication-type] English Abstract; Journal Article
  • [Publication-country] China
  • [Chemical-registry-number] 0 / Root Canal Irrigants; 9G34HU7RV0 / Edetic Acid; BBX060AN9V / Hydrogen Peroxide; DY38VHM5OD / Sodium Hypochlorite
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65. Fang C, Fan Y, Kong J, Gao Z, Balasubramanian N: Electrical detection of oligonucleotide using an aggregate of gold nanoparticles as a conductive tag. Anal Chem; 2008 Dec 15;80(24):9387-94
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Electrical detection of oligonucleotide using an aggregate of gold nanoparticles as a conductive tag.
  • As a result, Zr(4+) could link several hundreds of individual gold NPs together to form an aggregate of nanoparticles (ANP), which was capable of being used as a conductive tag for the electrical detection of DNA.
  • As a consequence, the conductive tags were linked to the phosphate groups and localized into the gap, which could modify the conductance between the two comb-shaped electrodes in turn.
  • Compared with the individual NPs used as the tag, a strong enhancement from the gold ANP was obtained.

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  • (PMID = 19072259.001).
  • [ISSN] 1520-6882
  • [Journal-full-title] Analytical chemistry
  • [ISO-abbreviation] Anal. Chem.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Oligonucleotides; 0 / Peptide Nucleic Acids; 7440-57-5 / Gold; 9007-49-2 / DNA
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66. Eriksson J, Jonasson S, Papaefthimiou D, Rasmussen U, Bergman B: Improving derivatization efficiency of BMAA utilizing AccQ-Tag in a complex cyanobacterial matrix. Amino Acids; 2009 Jan;36(1):43-8
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  • [Title] Improving derivatization efficiency of BMAA utilizing AccQ-Tag in a complex cyanobacterial matrix.
  • A rapid and sensitive HPLC method for fluorescence detection of the non-protein amino acid BMAA in cyanobacteria, utilizing the Waters AccQ-Tag chemistry and Chromolith Performance RP-18e columns was developed.

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  • (PMID = 18188663.001).
  • [ISSN] 1438-2199
  • [Journal-full-title] Amino acids
  • [ISO-abbreviation] Amino Acids
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] Austria
  • [Chemical-registry-number] 0 / Amino Acids, Diamino; 108SA6URTV / beta-N-methylamino-L-alanine
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67. Kollmar M: Use of the myosin motor domain as large-affinity tag for the expression and purification of proteins in Dictyostelium discoideum. Int J Biol Macromol; 2006 Aug 15;39(1-3):37-44
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Use of the myosin motor domain as large-affinity tag for the expression and purification of proteins in Dictyostelium discoideum.
  • The expression cassettes of the most successful vectors are based on a tandem affinity purification tag consisting of an octahistidine tag followed by the myosin motor domain tag.

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  • (PMID = 16516959.001).
  • [ISSN] 0141-8130
  • [Journal-full-title] International journal of biological macromolecules
  • [ISO-abbreviation] Int. J. Biol. Macromol.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Microtubule-Associated Proteins; 0 / Multiprotein Complexes; 0 / Recombinant Fusion Proteins; 144198-36-7 / dynactin; EC 3.6.4.1 / Myosins; EC 3.6.4.2 / Dyneins
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68. Amor-Mahjoub M, Suppini JP, Gomez-Vrielyunck N, Ladjimi M: The effect of the hexahistidine-tag in the oligomerization of HSC70 constructs. J Chromatogr B Analyt Technol Biomed Life Sci; 2006 Dec 5;844(2):328-34
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  • [Title] The effect of the hexahistidine-tag in the oligomerization of HSC70 constructs.
  • The hexahistidine is a fusion tag used for the isolation of proteins via an immobilized metal-ion affinity chromatography (IMAC).
  • In the present study, we have purified and analyzed two constructs of the heat shock protein HSC70 in the presence or the absence of the His-tag (C30WT-His(+)/C30WT and C30DeltaL-His(+)/C30DeltaL).
  • Results from SEC analysis indicated that the His-tag promotes the dimerization of C30DeltaL-His(+) but has no effect on the elution profile of C30WT-His(+), compared to their respective untagged forms C30DeltaL and C30WT.
  • These observations were also confirmed by AU analysis which indicates that C30DeltaL is stabilized in the dimeric form in the presence of the His-tag.
  • These results emphasize the need to remove the His-tag before structural characterization of some recombinant proteins.

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  • (PMID = 16904956.001).
  • [ISSN] 1570-0232
  • [Journal-full-title] Journal of chromatography. B, Analytical technologies in the biomedical and life sciences
  • [ISO-abbreviation] J. Chromatogr. B Analyt. Technol. Biomed. Life Sci.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] Netherlands
  • [Chemical-registry-number] 0 / HSP70 Heat-Shock Proteins; 0 / His-His-His-His-His-His; 0 / Mutant Proteins; 0 / Oligopeptides; 0 / Recombinant Proteins; 4QD397987E / Histidine
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69. Tavares FL, Seelaender MC: Hepatic denervation impairs the assembly and secretion of VLDL-TAG. Cell Biochem Funct; 2008 Sep-Oct;26(5):557-65
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Hepatic denervation impairs the assembly and secretion of VLDL-TAG.
  • The hepatic concentration of TAG and cholesterol, and the plasma concentration of TAG, cholesterol, VLDL-TAG, VLDL-cholesterol and HDL-cholesterol were measured, as well as mRNA expression of proteins involved in the process of VLDL assembly.
  • Secretion of VLDL-TAG (47.5 +/- 23.8 vs. 148.5 +/- 27.4 mg dL h(-1)) and mRNA expression of CPT I and apoB were reduced (p < 0.01) in the denervated animals.

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  • (PMID = 18543355.001).
  • [ISSN] 1099-0844
  • [Journal-full-title] Cell biochemistry and function
  • [ISO-abbreviation] Cell Biochem. Funct.
  • [Language] eng
  • [Publication-type] Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Apolipoproteins B; 0 / Lipoproteins, VLDL; 0 / Triglycerides; 0 / very low density lipoprotein triglyceride; 97C5T2UQ7J / Cholesterol
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70. Rush JS, Bertozzi CR: New aldehyde tag sequences identified by screening formylglycine generating enzymes in vitro and in vivo. J Am Chem Soc; 2008 Sep 17;130(37):12240-1
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  • [Title] New aldehyde tag sequences identified by screening formylglycine generating enzymes in vitro and in vivo.
  • This concise motif can be installed within heterologous proteins as a genetically encoded "aldehyde tag" for site-specific labeling with aminooxy- or hydrazide-functionalized probes.
  • We found that E. coli's FGE-like activity is similarly promiscuous, enabling the use of novel aldehyde tag sequences for in vivo modification of recombinant proteins.

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  • (PMID = 18722427.001).
  • [ISSN] 1520-5126
  • [Journal-full-title] Journal of the American Chemical Society
  • [ISO-abbreviation] J. Am. Chem. Soc.
  • [Language] ENG
  • [Grant] United States / NEI NIH HHS / EY / PN2 EY018241; United States / NIGMS NIH HHS / GM / R01 GM059907; United States / NIGMS NIH HHS / GM / GM059907; United States / Howard Hughes Medical Institute / /
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Aldehydes; 0 / Peptide Library; 0 / Peptides; 0 / Recombinant Proteins; 2491-15-8 / N-formylglycine; EC 3.1.6.- / Sulfatases; TE7660XO1C / Glycine
  • [Other-IDs] NLM/ PMC2721638
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71. Liu G, Wang Y, Wong L: FastTagger: an efficient algorithm for genome-wide tag SNP selection using multi-marker linkage disequilibrium. BMC Bioinformatics; 2010;11:66
NCI CPTC Antibody Characterization Program. NCI CPTC Antibody Characterization Program .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] FastTagger: an efficient algorithm for genome-wide tag SNP selection using multi-marker linkage disequilibrium.
  • Many algorithms have been developed to find a small subset of SNPs called tag SNPs that are sufficient to infer all the other SNPs.
  • Recent studies show that multi-marker LD can help further reduce the number of tag SNPs.
  • However, existing tag SNP selection algorithms based on multi-marker LD are both time-consuming and memory-consuming.
  • RESULTS: We propose an efficient algorithm called FastTagger to calculate multi-marker tagging rules and select tag SNPs based on multi-marker LD.
  • Our experiment results show that FastTagger is several times faster than existing multi-marker based tag SNP selection algorithms, and it consumes much less memory at the same time.
  • As a result, FastTagger can work on chromosomes containing more than 100 k SNPs using length-3 tagging rules.FastTagger also produces smaller sets of tag SNPs than existing multi-marker based algorithms, and the reduction ratio ranges from 3%-9% when length-3 tagging rules are used.
  • CONCLUSIONS: Generating multi-marker tagging rules is a computation intensive task, and it is the bottleneck of existing multi-marker based tag SNP selection methods.

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  • [Cites] Am J Hum Genet. 2001 Apr;68(4):978-89 [11254454.001]
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  • (PMID = 20113476.001).
  • [ISSN] 1471-2105
  • [Journal-full-title] BMC bioinformatics
  • [ISO-abbreviation] BMC Bioinformatics
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Genetic Markers
  • [Other-IDs] NLM/ PMC3098109
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72. Auerswald L, Gäde G: Endocrine control of TAG lipase in the fat body of the migratory locust, Locusta migratoria. Insect Biochem Mol Biol; 2006 Oct;36(10):759-68

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Endocrine control of TAG lipase in the fat body of the migratory locust, Locusta migratoria.
  • Aspects of the role and activation of the enzyme triacylglycerol lipase (TAG lipase) in the fat body of the migratory locust Locusta migratoria were investigated.
  • TAG lipase is under the hormonal control of the three endogenous adipokinetic peptides of the migratory locust, Locmi-AKH-I, Locmi-AKH-II and Locmi-AKH-III.
  • The activation of TAG lipase is also dose-dependent.
  • Analogues of the second messengers cAMP (cpt-cAMP) and IP(3) (F-IP(3)) both activate the enzyme glycogen phosphorylase whereas only cpt-cAMP, but not F-IP(3), activates TAG lipase; cpt-cAMP elevates the lipid levels in the haemolymph.
  • TAG lipase is stimulated by flight activity but activation is slower than that of glycogen phosphorylase: after 30 min of flight or after 5 min of flight plus 1h of subsequent rest, activity of TAG lipase is increased, but not immediately after 5 min of flight.

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  • (PMID = 17027842.001).
  • [ISSN] 0965-1748
  • [Journal-full-title] Insect biochemistry and molecular biology
  • [ISO-abbreviation] Insect Biochem. Mol. Biol.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Adrenergic alpha-Agonists; 0 / Insect Hormones; 0 / Insect Proteins; 0 / Lipids; 0 / Oligopeptides; 0 / adipokinetic hormone; 14O50WS8JD / Octopamine; EC 3.1.1.3 / Lipase; SZB83O1W42 / Pyrrolidonecarboxylic Acid
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73. Hosseini SD, Omar AR, Aini I, Ali AM: Diagnostic potential of recombinant protein of hexahistidine tag and infectious bursal disease virus VPX expressed in Escherichia coli. Acta Vet Hung; 2007 Sep;55(3):405-15
NCI CPTC Antibody Characterization Program. NCI CPTC Antibody Characterization Program .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Diagnostic potential of recombinant protein of hexahistidine tag and infectious bursal disease virus VPX expressed in Escherichia coli.
  • In this study, instead of using whole virus, recombinant protein of hexahistidine tag (His 6 tag) and VPX protein of IBDV expressed in E. coli was used as an alternative antigen to coat the ELISA plates.
  • There was a good correlation coefficient (R2 = 0.972) between the results of the ELISA using plates coated with monoclonal antibody against His 6 tag and those of the commercial IBDV ELISA kit.
  • Hence, His 6 tag and VPX recombinant protein expressed in E. coli has the potential for the development of ELISA for the measurement of IBDV-specific antibody.
  • [MeSH-major] Birnaviridae Infections / veterinary. Chickens. Histidine / immunology. Infectious bursal disease virus / immunology. Oligopeptides / immunology. Poultry Diseases / diagnosis. Viral Regulatory and Accessory Proteins

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  • (PMID = 17867467.001).
  • [ISSN] 0236-6290
  • [Journal-full-title] Acta veterinaria Hungarica
  • [ISO-abbreviation] Acta Vet. Hung.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] Hungary
  • [Chemical-registry-number] 0 / Antigens, Viral; 0 / His-His-His-His-His-His; 0 / Oligopeptides; 0 / Recombinant Proteins; 0 / Viral Regulatory and Accessory Proteins; 4QD397987E / Histidine
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74. Hayashi G, Hagihara M, Nakatani K: Application of L-DNA as a molecular tag. Nucleic Acids Symp Ser (Oxf); 2005;(49):261-2
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Application of L-DNA as a molecular tag.
  • We have focused our attention on these properties and applied L-DNA as a molecular tag.
  • As a result, L-DNA region formed like a "sticky end" and played a role of molecular tag.
  • According to the L-DNA tag sequence, the produced L-DNA-tagged PCR products were easily separated or hybridized on the solid surface where the complementary L-DNA was pre-immobilized.

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  • (PMID = 17150733.001).
  • [ISSN] 1746-8272
  • [Journal-full-title] Nucleic acids symposium series (2004)
  • [ISO-abbreviation] Nucleic Acids Symp Ser (Oxf)
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] England
  • [Chemical-registry-number] 0 / DNA Primers; 0 / Oligonucleotide Probes; 9007-49-2 / DNA
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75. de Bakker PI, Burtt NP, Graham RR, Guiducci C, Yelensky R, Drake JA, Bersaglieri T, Penney KL, Butler J, Young S, Onofrio RC, Lyon HN, Stram DO, Haiman CA, Freedman ML, Zhu X, Cooper R, Groop L, Kolonel LN, Henderson BE, Daly MJ, Hirschhorn JN, Altshuler D: Transferability of tag SNPs in genetic association studies in multiple populations. Nat Genet; 2006 Nov;38(11):1298-303
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Transferability of tag SNPs in genetic association studies in multiple populations.
  • A general question for linkage disequilibrium-based association studies is how power to detect an association is compromised when tag SNPs are chosen from data in one population sample and then deployed in another sample.
  • Specifically, it is important to know how well tags picked from the HapMap DNA samples capture the variation in other samples.
  • We picked tag SNPs using genotype data we collected in the HapMap samples and then evaluated the effective coverage of these tags in comparison to the entire set of common variants observed in the other samples.
  • These results demonstrate that the HapMap DNA samples can be used to select tags for genome-wide association studies in many samples around the world.

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  • [CommentIn] Nat Genet. 2006 Nov;38(11):1227-8 [17072295.001]
  • (PMID = 17057720.001).
  • [ISSN] 1061-4036
  • [Journal-full-title] Nature genetics
  • [ISO-abbreviation] Nat. Genet.
  • [Language] eng
  • [Grant] United States / NCI NIH HHS / CA / CA098758; United States / NCI NIH HHS / CA / CA54281; United States / NCI NIH HHS / CA / CA63464; United States / NIDDK NIH HHS / DK / DK067288; United States / NHLBI NIH HHS / HL / HL074166
  • [Publication-type] Evaluation Studies; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
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76. Tirat A, Freuler F, Stettler T, Mayr LM, Leder L: Evaluation of two novel tag-based labelling technologies for site-specific modification of proteins. Int J Biol Macromol; 2006 Aug 15;39(1-3):66-76
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Evaluation of two novel tag-based labelling technologies for site-specific modification of proteins.
  • For some applications, proteins have to be produced with specific modifications such as tags for protein purification, fluorescent or radiometric labels for detection, glycosylation and phosphorylation for biological activity, and many more.
  • Firstly, we explored a method based on the human DNA repair protein O6-alkylguanine-DNA alkyltransferase (hAGT) as a fusion tag for site-directed attachment of small molecules.
  • The AGT-tag (SNAP-tag) can accept almost any chemical moiety when it is attached to the guanine base through a benzyl group.
  • In our experiments we were able to label a target protein fused to the AGT-tag with various fluorophores coupled to O6-benzylguanine.
  • Secondly, we tested in vivo and in vitro site-directed biotinylation with two different tags, consisting of either 15 (AviTag) or 72 amino acids (BioEase tag), which serve as a substrate for bacterial biotin ligase birA.
  • When birA protein was co-expressed in E. coli biotin was incorporated almost completely into a model protein which carried these recognition tags at its C-terminus.
  • For both biotinylation methods, peptide mapping and LC-MS proved the highly site-specific modification of the corresponding tags.

  • Hazardous Substances Data Bank. BIOTIN .
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  • (PMID = 16503347.001).
  • [ISSN] 0141-8130
  • [Journal-full-title] International journal of biological macromolecules
  • [ISO-abbreviation] Int. J. Biol. Macromol.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Escherichia coli Proteins; 0 / Fluorescent Dyes; 0 / Recombinant Fusion Proteins; 0 / Repressor Proteins; 0 / Transcription Factors; 12133JR80S / Guanosine; 6SO6U10H04 / Biotin; EC 2.1.1.63 / O(6)-Methylguanine-DNA Methyltransferase; EC 6.3.- / Carbon-Nitrogen Ligases; EC 6.3.4.15 / birA protein, E coli
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77. Emmersen J: Generating unigene collections of expressed sequence tag sequences for use in mass spectrometry identification. Methods Mol Biol; 2007;367:77-86

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Generating unigene collections of expressed sequence tag sequences for use in mass spectrometry identification.
  • Expressed sequence tag sequences remain the largest resource of DNA sequence for most organisms despite recent advances in genome sequencing.
  • [MeSH-major] Databases, Nucleic Acid. Expressed Sequence Tags. Mass Spectrometry / methods. Sequence Analysis, DNA / methods

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  • (PMID = 17185771.001).
  • [ISSN] 1064-3745
  • [Journal-full-title] Methods in molecular biology (Clifton, N.J.)
  • [ISO-abbreviation] Methods Mol. Biol.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
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78. Li Y: Commonly used tag combinations for tandem affinity purification. Biotechnol Appl Biochem; 2010 Feb;55(2):73-83
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Commonly used tag combinations for tandem affinity purification.
  • TAP (tandem affinity purification) allows rapid and clean isolation of a tagged protein along with its interacting partners from cell lysates.
  • The key feature of TAP is the use of a dual-affinity tag, which is fused to the protein of interest.
  • The original TAP tag consisted of two IgG-binding units of Protein A of Staphylococcus aureus and the calmodulin-binding peptide.
  • As the technique has been widely exploited, a number of alternative TAP tags based on other affinity handles have been developed.
  • The present review gives an overview of the various tag combinations for TAP with a highlight on those alternatives that result in improved yields or unique features.
  • The information provided should assist in the selection and development of TAP tags for specific applications.

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  • (PMID = 20156193.001).
  • [ISSN] 1470-8744
  • [Journal-full-title] Biotechnology and applied biochemistry
  • [ISO-abbreviation] Biotechnol. Appl. Biochem.
  • [Language] eng
  • [Publication-type] Journal Article; Review
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Recombinant Fusion Proteins; 0 / Staphylococcal Protein A
  • [Number-of-references] 128
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79. Furukawa J, Shinohara Y, Kuramoto H, Miura Y, Shimaoka H, Kurogochi M, Nakano M, Nishimura S: Comprehensive approach to structural and functional glycomics based on chemoselective glycoblotting and sequential tag conversion. Anal Chem; 2008 Feb 15;80(4):1094-101
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Comprehensive approach to structural and functional glycomics based on chemoselective glycoblotting and sequential tag conversion.
  • Here we present a novel strategy that allows flexible and sequential incorporation of various functional tags into oligosaccharides derived from biological samples in a practical manner.
  • Since our approach enables rapid, flexible, and highly efficient tag conversion, it will contribute greatly to a variety of glycomic studies.

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  • (PMID = 18205388.001).
  • [ISSN] 0003-2700
  • [Journal-full-title] Analytical chemistry
  • [ISO-abbreviation] Anal. Chem.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Glycopeptides; 0 / Glycoproteins; 0 / Polysaccharides; EC 3.5.1.52 / Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase
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80. Cahová M, Daňková H, Páleníčková E, Papáčková Z, Kazdová L: The autophagy-lysosomal pathway is involved in TAG degradation in the liver: the effect of high-sucrose and high-fat diet. Folia Biol (Praha); 2010;56(4):173-82

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] The autophagy-lysosomal pathway is involved in TAG degradation in the liver: the effect of high-sucrose and high-fat diet.
  • This study was designed to test the role of liver lipases in the degradation of liver triacylglycerols (TAG) and to determine the effect of dietary induced TAG accumulation in the liver on regulation of their lipolysis.
  • Administration of both diets resulted in liver TAG accumulation (HFD >>> HSD).
  • The only lipase capable to hydrolyse intracellular TAG was LAL.
  • We demonstrated that LAL is a dominant enzyme involved in degradation of intracellular TAG in the liver and its translocation into the fraction of active (auto)phagolysosomes is stimulated by diet-induced TAG accumulation.

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  • (PMID = 20974050.001).
  • [ISSN] 0015-5500
  • [Journal-full-title] Folia biologica
  • [ISO-abbreviation] Folia Biol. (Praha)
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] Czech Republic
  • [Chemical-registry-number] 0 / Dietary Fats; 0 / Dietary Sucrose; 0 / Triglycerides; EC 3.1.1.13 / Sterol Esterase
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81. Malkov AV, Figlus M, Stoncius S, Kocovský P: Organocatalysis with a fluorous tag: asymmetric reduction of imines with trichlorosilane catalyzed by amino acid-derived formamides. J Org Chem; 2007 Feb 16;72(4):1315-25
Hazardous Substances Data Bank. FLUORINE .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Organocatalysis with a fluorous tag: asymmetric reduction of imines with trichlorosilane catalyzed by amino acid-derived formamides.
  • Appending a fluorous tag, as in 5a-c, simplifies the isolation procedure, while preserving high enantioselectivity (< or =92% ee).

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  • Hazardous Substances Data Bank. TRICHLOROSILANE .
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  • (PMID = 17288379.001).
  • [ISSN] 0022-3263
  • [Journal-full-title] The Journal of organic chemistry
  • [ISO-abbreviation] J. Org. Chem.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Amino Acids; 0 / Formamides; 0 / Imines; 0 / Silanes; 284SYP0193 / Fluorine; QZY2645L6V / trichlorosilane
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82. Miller LW, Cai Y, Sheetz MP, Cornish VW: In vivo protein labeling with trimethoprim conjugates: a flexible chemical tag. Nat Methods; 2005 Apr;2(4):255-7
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] In vivo protein labeling with trimethoprim conjugates: a flexible chemical tag.
  • Here we demonstrate that trimethoprim derivatives can be used to selectively tag Escherichia coli dihydrofolate reductase (eDHFR) fusion proteins in wild-type mammalian cells with minimal background and fast kinetics.

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  • (PMID = 15782216.001).
  • [ISSN] 1548-7091
  • [Journal-full-title] Nature methods
  • [ISO-abbreviation] Nat. Methods
  • [Language] eng
  • [Grant] United States / NIGMS NIH HHS / GM / GM071754-01
  • [Publication-type] Evaluation Studies; Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, U.S. Gov't, P.H.S.
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Recombinant Fusion Proteins; AN164J8Y0X / Trimethoprim
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83. Nonaka H, Fujishima SH, Uchinomiya SH, Ojida A, Hamachi I: FLAG-tag selective covalent protein labeling via a binding-induced acyl-transfer reaction. Bioorg Med Chem Lett; 2009 Dec 1;19(23):6696-9

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] FLAG-tag selective covalent protein labeling via a binding-induced acyl-transfer reaction.
  • A FLAG tag selective protein labeling method is newly developed in this study.
  • Coupling of the selective binding between synthetic Ni-complex probe and FLAG tag with the acyl transfer reaction enables the site-selective covalent modification of FLAG peptide and FLAG-tag fused protein.

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  • (PMID = 19837586.001).
  • [ISSN] 1464-3405
  • [Journal-full-title] Bioorganic & medicinal chemistry letters
  • [ISO-abbreviation] Bioorg. Med. Chem. Lett.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Oligopeptides; 0 / Peptides; 0 / Proteins; 98849-88-8 / FLAG peptide
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84. Nakagawa T, Nishiuchi K, Akaki J, Iwata H, Satou R, Suzuki F, Nakamura Y: Efficient production of recombinant human (pro)renin utilizing a decahistidine tag attached at the C-terminus. Biosci Biotechnol Biochem; 2007 Jan;71(1):256-60

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Efficient production of recombinant human (pro)renin utilizing a decahistidine tag attached at the C-terminus.
  • Human prorenin attached by a decahistidine tag at the C-terminus was produced in Chinese hamster ovary cells.
  • The enzymatic properties of mature renin carrying the tag were similar to native renin.
  • These results indicate that the introduction of a decahistidine tag at the C-terminus does not interfere with either the correct folding of prorenin or the catalytic activity of mature renin.

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  • (PMID = 17213649.001).
  • [ISSN] 0916-8451
  • [Journal-full-title] Bioscience, biotechnology, and biochemistry
  • [ISO-abbreviation] Biosci. Biotechnol. Biochem.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] Japan
  • [Chemical-registry-number] 0 / Recombinant Proteins; EC 3.4.23.15 / Renin
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85. Kim J, Iyer VR: Identifying chromosomal targets of DNA-binding proteins by Sequence Tag Analysis of Genomic Enrichment (STAGE). Curr Protoc Mol Biol; 2005 Nov;Chapter 21:Unit 21.10

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Identifying chromosomal targets of DNA-binding proteins by Sequence Tag Analysis of Genomic Enrichment (STAGE).
  • Sequence Tag Analysis of Genomic Enrichment (STAGE) is a method for experimentally identifying the in vivo chromosomal targets of DNA-binding proteins in any sequenced genome.
  • STAGE generates 21-bp tags derived from DNA isolated by chromatin immunoprecipitation (ChIP; UNIT 21.3).
  • Concatamers of tags are cloned and sequenced to yield a STAGE library.
  • Tags in the library represent DNA fragments that were occupied by the DNA-binding protein, and mapping these tag sequences to the genome identifies the binding loci of the DNA-binding protein in vivo.

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  • (PMID = 18265357.001).
  • [ISSN] 1934-3647
  • [Journal-full-title] Current protocols in molecular biology
  • [ISO-abbreviation] Curr Protoc Mol Biol
  • [Language] ENG
  • [Publication-type] Journal Article
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / DNA-Binding Proteins; 0 / Indicators and Reagents
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86. Shahravan SH, Qu X, Chan IS, Shin JA: Enhancing the specificity of the enterokinase cleavage reaction to promote efficient cleavage of a fusion tag. Protein Expr Purif; 2008 Jun;59(2):314-9
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Enhancing the specificity of the enterokinase cleavage reaction to promote efficient cleavage of a fusion tag.
  • In our work with designed minimalist proteins based on the bZIP motif, we have found our His-tagged proteins to be prone to inclusion body formation and aggregation; we suspect this problem is largely due to the His tag, known to promote aggregation.
  • Using AhR6-C/EBP, a hybrid of the AhR basic region and C/EBP leucine zipper, as representative of our bZIP-like protein family, we attempted removal of the His tag with enterokinase (EK) but obtained the desired cleavage product in very small yield.

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  • (PMID = 18406169.001).
  • [ISSN] 1096-0279
  • [Journal-full-title] Protein expression and purification
  • [ISO-abbreviation] Protein Expr. Purif.
  • [Language] ENG
  • [Grant] United States / NIGMS NIH HHS / GM / GM069041-01; United States / NIGMS NIH HHS / GM / R01 GM069041; United States / NIGMS NIH HHS / GM / GM069041-03; United States / NIGMS NIH HHS / GM / GM063220-01A1; United States / NIGMS NIH HHS / GM / R01 GM069041-02; United States / NIGMS NIH HHS / GM / R01 GM063220-01A1; United States / NIGMS NIH HHS / GM / R01 GM069041-04; United States / NIGMS NIH HHS / GM / GM069041-04; United States / NIGMS NIH HHS / GM / GM069041-02; United States / NIGMS NIH HHS / GM / R01 GM069041-01; United States / NIGMS NIH HHS / GM / R01 GM069041-03
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / CCAAT-Enhancer-Binding Proteins; 0 / Receptors, Aryl Hydrocarbon; 0 / Recombinant Fusion Proteins; 8W8T17847W / Urea; EC 3.4.21.9 / Enteropeptidase
  • [Other-IDs] NLM/ NIHMS52076; NLM/ PMC2441903
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87. Harfmann RG, Julka S, Cortes HJ: Instability of hexane-acetonitrile mobile phases used for the chromatographic analysis of triacylglycerides. J Sep Sci; 2008 Apr;31(6-7):915-20
Hazardous Substances Data Bank. ACETONITRILE .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Instability of hexane-acetonitrile mobile phases used for the chromatographic analysis of triacylglycerides.
  • The technique has been applied for the separation of numerous complex mixtures including triacylglycerides (TAG).
  • Determination of TAG in food products such as rice, palm, and canola oils have been previously described and the technique of choice utilizes a silver-modified silica column with hexane-ACN as the mobile phase.
  • Repeated retention time inconsistencies were experienced in our studies when this mobile phase was applied to the separation of natural and synthetic mixtures containing TAG.
  • The data obtained suggest that unless evaporative loss of the mobile phase is prevented, TAG retention time irreproducibility can be significant when using mobile-phase mixtures prepared with ACN or PCN.

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  • (PMID = 18381698.001).
  • [ISSN] 1615-9314
  • [Journal-full-title] Journal of separation science
  • [ISO-abbreviation] J Sep Sci
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] Germany
  • [Chemical-registry-number] 0 / Acetonitriles; 0 / Hexanes; 0 / Triglycerides; 2DDG612ED8 / n-hexane; Z072SB282N / acetonitrile
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88. Otani T, Hashizume T, Nagaoka T, Fukuda T, Tang CK, Salomon DS, Seno M: Production of biologically active IgG hinge-tag soluble epidermal growth factor receptors (ErbB). Biotechnol Lett; 2010 Mar;32(3):361-6
NCI CPTC Antibody Characterization Program. NCI CPTC Antibody Characterization Program .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Production of biologically active IgG hinge-tag soluble epidermal growth factor receptors (ErbB).
  • The IgG hinge-tag should be a simple method to design soluble dimers that would be useful for high throughput screening of ligands, antagonists or derivatives.

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  • (PMID = 19898750.001).
  • [ISSN] 1573-6776
  • [Journal-full-title] Biotechnology letters
  • [ISO-abbreviation] Biotechnol. Lett.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] Netherlands
  • [Chemical-registry-number] 0 / BTC protein, human; 0 / Betacellulin; 0 / Immunoglobulin G; 0 / Intercellular Signaling Peptides and Proteins; 0 / Neuregulin-1; 0 / Recombinant Proteins; EC 2.7.10.1 / Receptor, Epidermal Growth Factor
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89. Du P, Loulakis P, Xie Z, Simons SP, Geoghegan KF: Tandem mass spectrometry of multiply phosphorylated forms of a 'histidine-tag' derived from a recombinant protein kinase expressed in bacteria. Rapid Commun Mass Spectrom; 2005;19(4):547-51
NCI CPTAC Assay Portal. NCI CPTAC Assay Portal .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Tandem mass spectrometry of multiply phosphorylated forms of a 'histidine-tag' derived from a recombinant protein kinase expressed in bacteria.
  • The amino-terminal tag had the sequence GSSHHHHHHSSGLVPRGSHMK-.
  • Tryptic digestion of the product followed by analysis by liquid chromatography/mass spectrometry (LC/MS) and tandem mass spectrometry (MS/MS) showed that phosphorylation could occur on the five serine residues of the tag.
  • Mono-, bis-, tris-, tetra- and pentaphosphorylated forms of the tag were detected, and their behavior in MS/MS was studied using a quadrupole/time-of-flight mass spectrometer.
  • The assignment of phosphorylation sites for incompletely phosphorylated forms of the tag peptide was challenging, but it appeared that Ser-10 and Ser-11 of the tag were more likely to be phosphorylated than Ser-2 and Ser-3.

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  • [Copyright] Copyright 2005 John Wiley & Sons, Ltd.
  • (PMID = 15669100.001).
  • [ISSN] 0951-4198
  • [Journal-full-title] Rapid communications in mass spectrometry : RCM
  • [ISO-abbreviation] Rapid Commun. Mass Spectrom.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] England
  • [Chemical-registry-number] 0 / Peptides; 0 / Recombinant Proteins; 4QD397987E / Histidine; EC 2.7.- / Protein Kinases
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90. Wheatley GH 3rd, Gurbuz AT, Rodriguez-Lopez JA, Ramaiah VG, Olsen D, Williams J, Diethrich EB: Midterm outcome in 158 consecutive Gore TAG thoracic endoprostheses: single center experience. Ann Thorac Surg; 2006 May;81(5):1570-7; discussion 1577

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Midterm outcome in 158 consecutive Gore TAG thoracic endoprostheses: single center experience.
  • We reviewed our consecutive clinical experience with the Gore TAG endoprosthesis (W. L.
  • METHODS: After obtaining institutional review board approval, 158 high surgical risk patients underwent attempted delivery of a Gore TAG thoracic endoprosthesis between February 2000 and July 2004.
  • CONCLUSIONS: Endoluminal grafting of multiple types of descending thoracic aorta pathologies with the Gore TAG thoracic endoprosthesis is feasible and safe in higher surgical risk patients.

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  • (PMID = 16631636.001).
  • [ISSN] 1552-6259
  • [Journal-full-title] The Annals of thoracic surgery
  • [ISO-abbreviation] Ann. Thorac. Surg.
  • [Language] eng
  • [Publication-type] Clinical Trial; Journal Article
  • [Publication-country] Netherlands
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91. Nogi T, Sangawa T, Tabata S, Nagae M, Tamura-Kawakami K, Beppu A, Hattori M, Yasui N, Takagi J: Novel affinity tag system using structurally defined antibody-tag interaction: application to single-step protein purification. Protein Sci; 2008 Dec;17(12):2120-6
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Novel affinity tag system using structurally defined antibody-tag interaction: application to single-step protein purification.
  • Concatenation of the short recognition sequence enabled the successful engineering of an 18-residue affinity tag with ideal solution binding kinetics, providing a low-cost purification means when combined with nondenaturing elution by water-miscible organic solvents.

  • Cellosaurus - a cell line knowledge resource. culture/stock collections - Cellosaurus - a cell line knowledge resource .
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  • (PMID = 18787202.001).
  • [ISSN] 1469-896X
  • [Journal-full-title] Protein science : a publication of the Protein Society
  • [ISO-abbreviation] Protein Sci.
  • [Language] eng
  • [Databank-accession-numbers] PDB/ 2ZPK
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Antibodies, Monoclonal; 0 / Cell Adhesion Molecules, Neuronal; 0 / Epitopes; 0 / Extracellular Matrix Proteins; 0 / Immunoglobulin Fab Fragments; 0 / Nerve Tissue Proteins; 0 / Peptides; 0 / Proteins; 0 / Recombinant Fusion Proteins; 0 / SPON1 protein, human; EC 3.4.21.- / Serine Endopeptidases; EC 3.4.21.- / reelin protein
  • [Other-IDs] NLM/ PMC2590912
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92. Aly MR, Rochaix P, Amessou M, Johannes L, Florent JC: Synthesis of globo- and isoglobotriosides bearing a cinnamoylphenyl tag as novel electrophilic thiol-specific carbohydrate reagents. Carbohydr Res; 2006 Sep 4;341(12):2026-36
Hazardous Substances Data Bank. Shiga toxin .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Synthesis of globo- and isoglobotriosides bearing a cinnamoylphenyl tag as novel electrophilic thiol-specific carbohydrate reagents.
  • These glycosides were smoothly functionalized with a 6-(p-cinnamoylphenoxy)-hexyl tether tag as novel electrophilic thiol-specific carbohydrate reagents.
  • Immobilization of the globotrioside conjugate to Thiopropyl Sepharose 6B for purification of B-subunit of Shiga toxin (StxB) and coupling of a model cysteine-containing protein (StxB-Z(n)-Cys) to the isoglobotrioside conjugate were both performed with high efficiency.

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  • (PMID = 16777082.001).
  • [ISSN] 0008-6215
  • [Journal-full-title] Carbohydrate research
  • [ISO-abbreviation] Carbohydr. Res.
  • [Language] eng
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] Netherlands
  • [Chemical-registry-number] 0 / Cinnamates; 0 / Oligosaccharides; 0 / Phenols; 0 / Sulfhydryl Reagents; 0 / Trioses; 5S5A2Q39HX / Chalcone; 62610-50-8 / sepharose CL 6B; 75757-64-1 / Shiga Toxin; 9012-36-6 / Sepharose
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93. Rodriguez P, Mitton B, Kranias EG: Phosphorylation of glutathione-S-transferase by protein kinase C-alpha implications for affinity-tag purification. Biotechnol Lett; 2005 Dec;27(23-24):1869-73
Hazardous Substances Data Bank. L-SERINE .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Phosphorylation of glutathione-S-transferase by protein kinase C-alpha implications for affinity-tag purification.
  • Therefore, since GST itself may be a target for a number of catalytic enzymes, failure to remove the GST tag from the recombinant protein may lead to inaccurate conclusions.

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  • (PMID = 16328982.001).
  • [ISSN] 0141-5492
  • [Journal-full-title] Biotechnology letters
  • [ISO-abbreviation] Biotechnol. Lett.
  • [Language] eng
  • [Grant] United States / NHLBI NIH HHS / HL / HL-26057; United States / NHLBI NIH HHS / HL / HL-64018; United States / NHLBI NIH HHS / HL / HL-77101
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural
  • [Publication-country] Netherlands
  • [Chemical-registry-number] 0 / Recombinant Fusion Proteins; 452VLY9402 / Serine; EC 2.5.1.18 / Glutathione Transferase; EC 2.7.11.13 / Protein Kinase C-alpha
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94. Campo JL, Dávila SG: Effect of bad collocation of wing tag on feather amelanosis, heterophil-to-lymphocyte ratio, fluctuating asymmetry, and tonic immobility duration in white-faced black spanish hens. Poult Sci; 2008 Aug;87(8):1540-3

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Effect of bad collocation of wing tag on feather amelanosis, heterophil-to-lymphocyte ratio, fluctuating asymmetry, and tonic immobility duration in white-faced black spanish hens.
  • The purpose of the present study was to analyze the effects of bad collocation of the wing tag on feather amelanosis, the heterophil-to-lymphocyte ratio, fluctuating asymmetry, and tonic immobility duration at 140 d of age in hens from the White-Faced Black Spanish breed.
  • There was a significant difference (P < 0.05) for the heterophil-to-lymphocyte ratio and the tonic immobility duration between groups of females with bad or good collocation of the wing tag, with the ratio being higher and the duration being longer in the former group.
  • Females with bad collocation of the wing tag had significant heterophilia and lymphopenia (P < 0.05).
  • There was a significant difference (P < 0.05) in the fluctuating asymmetry of the middle and hind toe lengths, the combined asymmetry of the 4 toes, the fluctuating asymmetry of the earlobe area, and the combined asymmetry of toe and leg lengths and earlobe and wattle areas, with the asymmetry of birds with bad collocation of the wing tag being larger than that of birds with good collocation of the wing tag.
  • Results indicate that bad collocation of the wing tag negatively affects measures of stress, such as the heterophil-to-lymphocyte ratio, fluctuating asymmetry, and tonic immobility duration.

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  • (PMID = 18648046.001).
  • [ISSN] 0032-5791
  • [Journal-full-title] Poultry science
  • [ISO-abbreviation] Poult. Sci.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
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95. Lemaire R, Stauber J, Wisztorski M, Van Camp C, Desmons A, Deschamps M, Proess G, Rudlof I, Woods AS, Day R, Salzet M, Fournier I: Tag-mass: specific molecular imaging of transcriptome and proteome by mass spectrometry based on photocleavable tag. J Proteome Res; 2007 Jun;6(6):2057-67
The Lens. Cited by Patents in .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Tag-mass: specific molecular imaging of transcriptome and proteome by mass spectrometry based on photocleavable tag.
  • We have now developed specific targeting probes (oligonucleotides, antibodies), named Tag-Mass.
  • This approach is based on probes modified with a photocleavable linker coupled with a tag cleaved and detected using mass spectrometry.
  • Tag-Mass development is the key for a rapid, sensitive, and accurate approach to correlate levels of expression of different mRNA or proteins in diseases.

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  • (PMID = 17477556.001).
  • [ISSN] 1535-3893
  • [Journal-full-title] Journal of proteome research
  • [ISO-abbreviation] J. Proteome Res.
  • [Language] eng
  • [Grant] United States / Intramural NIH HHS / / Z99 DA999999
  • [Publication-type] Journal Article; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Antibodies; 0 / Molecular Probes; 0 / Oligonucleotide Probes; 0 / Proteins; 0 / Proteome; 0 / RNA, Messenger
  • [Other-IDs] NLM/ NIHMS236773; NLM/ PMC2947822
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96. Cao H, Lin R: Quantitative evaluation of His-tag purification and immunoprecipitation of tristetraprolin and its mutant proteins from transfected human cells. Biotechnol Prog; 2009 Mar-Apr;25(2):461-7
Hazardous Substances Data Bank. (L)-HISTIDINE .

  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] Quantitative evaluation of His-tag purification and immunoprecipitation of tristetraprolin and its mutant proteins from transfected human cells.
  • Histidine (His)-tag is widely used for affinity purification of recombinant proteins, but the yield and purity of expressed proteins are quite different.
  • The objective of this study was to evaluate His-tag procedure quantitatively and to compare it with immunoprecipitation using radiolabeled tristetraprolin (TTP), a zinc finger protein with anti-inflammatory property.
  • The results showed that (1) His-tag purification was more effective than immunoprecipitation for TTP purification;.

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  • [Copyright] (c) 2009 American Institute of Chemical Engineers Biotechnol.
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  • (PMID = 19330843.001).
  • [ISSN] 1520-6033
  • [Journal-full-title] Biotechnology progress
  • [ISO-abbreviation] Biotechnol. Prog.
  • [Language] eng
  • [Grant] United States / Intramural NIH HHS / / Z01 ES090080-10
  • [Publication-type] Evaluation Studies; Journal Article; Research Support, N.I.H., Intramural; Research Support, U.S. Gov't, Non-P.H.S.
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / His-His-His-His-His-His; 0 / Mutant Proteins; 0 / Oligopeptides; 0 / Recombinant Fusion Proteins; 0 / Tristetraprolin; 4QD397987E / Histidine
  • [Other-IDs] NLM/ NIHMS88505; NLM/ PMC2680604
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97. Makaroun MS, Dillavou ED, Kee ST, Sicard G, Chaikof E, Bavaria J, Williams D, Cambria RP, Mitchell RS: Endovascular treatment of thoracic aortic aneurysms: results of the phase II multicenter trial of the GORE TAG thoracic endoprosthesis. J Vasc Surg; 2005 Jan;41(1):1-9
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  • [Title] Endovascular treatment of thoracic aortic aneurysms: results of the phase II multicenter trial of the GORE TAG thoracic endoprosthesis.
  • The GORE TAG endoprosthesis, an investigational nitinol-supported expanded polytetrafluoroethylene tube graft with diameters of 26 to 40 mm, is the first DTA device to enter phase II trials in the United States and has been used worldwide for a host of thoracic pathologies.
  • METHODS: A multicenter prospective nonrandomized phase II study of the GORE TAG endoprosthesis was conducted at 17 sites.
  • CONCLUSIONS: The GORE TAG thoracic endoprosthesis provides a safe alternative for the treatment of DTAs, with low mortality, relatively low morbidity, and excellent 2-year freedom from aneurysm-related death.

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  • (PMID = 15696036.001).
  • [ISSN] 0741-5214
  • [Journal-full-title] Journal of vascular surgery
  • [ISO-abbreviation] J. Vasc. Surg.
  • [Language] eng
  • [Publication-type] Clinical Trial; Clinical Trial, Phase II; Journal Article; Multicenter Study; Research Support, Non-U.S. Gov't
  • [Publication-country] United States
  • [Chemical-registry-number] 9002-84-0 / Polytetrafluoroethylene
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98. Callaway TR, Dowd SE, Edrington TS, Anderson RC, Krueger N, Bauer N, Kononoff PJ, Nisbet DJ: Evaluation of bacterial diversity in the rumen and feces of cattle fed different levels of dried distillers grains plus solubles using bacterial tag-encoded FLX amplicon pyrosequencing. J Anim Sci; 2010 Dec;88(12):3977-83
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  • [Title] Evaluation of bacterial diversity in the rumen and feces of cattle fed different levels of dried distillers grains plus solubles using bacterial tag-encoded FLX amplicon pyrosequencing.
  • In the present study, we utilized a new molecular method, bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) that can perform diversity analyses of gastrointestinal bacterial populations.

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  • (PMID = 20729286.001).
  • [ISSN] 1525-3163
  • [Journal-full-title] Journal of animal science
  • [ISO-abbreviation] J. Anim. Sci.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / DNA, Bacterial
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99. Funari VA, Voevodski K, Leyfer D, Yerkes L, Cramer D, Tolan DR: Quantitative gene expression profiles in real time from expressed sequence tag databases. Gene Expr; 2010;14(6):321-36
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  • [Title] Quantitative gene expression profiles in real time from expressed sequence tag databases.
  • An accumulation of expressed sequence tag (EST) data in the public domain and the availability of bioinformatic programs have made EST gene expression profiling a common practice.
  • [MeSH-major] Expressed Sequence Tags. Gene Expression Profiling. Genome, Human

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  • (PMID = 20635574.001).
  • [ISSN] 1052-2166
  • [Journal-full-title] Gene expression
  • [ISO-abbreviation] Gene Expr.
  • [Language] eng
  • [Grant] United States / NIGMS NIH HHS / GM / R25-GM62463; United States / NIDDK NIH HHS / DK / DK43521; United States / NIDDK NIH HHS / DK / DK065089; United States / NIDDK NIH HHS / DK / R01 DK065089; United States / NIDDK NIH HHS / DK / R01 DK065089-04; United States / NIGMS NIH HHS / GM / R25 GM062463
  • [Publication-type] Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / DNA Primers; 0 / Genetic Markers
  • [Other-IDs] NLM/ NIHMS237749; NLM/ PMC2954622
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100. Humbert N, Schürmann P, Zocchi A, Neuhaus JM, Ward TR: High-yield production and purification of recombinant T7-tag mature streptavidin in glucose-stressed E. coli. Methods Mol Biol; 2008;418:101-10
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  • [Source] The source of this record is MEDLINE®, a database of the U.S. National Library of Medicine.
  • [Title] High-yield production and purification of recombinant T7-tag mature streptavidin in glucose-stressed E. coli.
  • Herein, we report on the production in Escherichia coli and the purification of a recombinant mature streptavidin bearing a T7-tag.

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  • (PMID = 18287653.001).
  • [ISSN] 1064-3745
  • [Journal-full-title] Methods in molecular biology (Clifton, N.J.)
  • [ISO-abbreviation] Methods Mol. Biol.
  • [Language] eng
  • [Publication-type] Journal Article
  • [Publication-country] United States
  • [Chemical-registry-number] 0 / Bacterial Proteins; 0 / Recombinant Proteins; 9013-20-1 / Streptavidin; IY9XDZ35W2 / Glucose
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